scholarly journals Controlling DNA Translocation Through Solid-state Nanopores

2020 ◽  
Vol 15 (1) ◽  
Author(s):  
Zhishan Yuan ◽  
Youming Liu ◽  
Min Dai ◽  
Xin Yi ◽  
Chengyong Wang
2021 ◽  
Author(s):  
Ngan Pham ◽  
Yao Yao ◽  
Chenyu Wen ◽  
Shiyu Li ◽  
Shuangshuang Zeng ◽  
...  

Abstract Solid-state nanopores (SSNPs) of on-demand shape and size can facilitate desired sensor performance. However, reproducible production of arrayed nanopores of predefined geometry is yet to demonstrate despite of numerous methods explored. Here, bowl-shape SSNPs combining unique properties of ultrathin membrane and tapering geometry are demonstrated. The bowl-SSNP upper opening is 100-120 nm in diameter, with the bottom opening reaching sub-5 nm. Numerical simulation reveals the formation of multiple electroosmotic vortexes (EOVs) originating from distributed surface charge around the pore-bowl. The EOVs determine, collaboratively with electrophoretic force, how nanoscale objects translocate the bowl-SSNPs. Exceptional rectification with higher frequencies, longer duration and larger amplitude is found when DNA strands translocate downwards from the upper large opening than upwards from the bottom smallest restriction. The rectification is a manifestation of the interplay between electrophoresis and electroosmosis. The resourceful silicon nanofabrication technology is ingeniously shown to enable innovative nanopore designs targeting unprecedented sensor applications.


Nanoscale ◽  
2017 ◽  
Vol 9 (45) ◽  
pp. 18012-18021 ◽  
Author(s):  
Kidan Lee ◽  
Hyomin Lee ◽  
Seung-Hyun Lee ◽  
Hyun-Mi Kim ◽  
Ki-Bum Kim ◽  
...  

Guide nanostructures fabricated in front of conventional nanopore device would significantly increase both SNR and dwell time of DNA translocation.


2014 ◽  
Vol 25 (27) ◽  
pp. 275501 ◽  
Author(s):  
Rena Akahori ◽  
Takanobu Haga ◽  
Toshiyuki Hatano ◽  
Itaru Yanagi ◽  
Takeshi Ohura ◽  
...  

2009 ◽  
Vol 20 (18) ◽  
pp. 185101 ◽  
Author(s):  
Hongbo Peng ◽  
Xinsheng Sean Ling

Nanoscale ◽  
2015 ◽  
Vol 7 (24) ◽  
pp. 10752-10759 ◽  
Author(s):  
Zexi Liang ◽  
Zhipeng Tang ◽  
Ji Li ◽  
Rui Hu ◽  
Dapeng Yu ◽  
...  

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