A weighted string kernel for protein fold recognition

BMC Bioinformatics ◽

10.1186/s12859-017-1795-5 ◽

2017 ◽

Vol 18 (1) ◽

Author(s):

Saghi Nojoomi ◽

Patrice Koehl

Keyword(s):

Fold Recognition ◽

Protein Fold ◽

String Kernel ◽

Protein Fold Recognition

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ASFold-DNN: Protein Fold Recognition based on Evolutionary Features with Variable Parameters using Full Connected Neural Network

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2021.3089168 ◽

2021 ◽

pp. 1-1

Author(s):

Xinyi Qin ◽

Lu Zhang ◽

in Liu ◽

Ziwei Xu ◽

Guangzhong Liu

Keyword(s):

Neural Network ◽

Fold Recognition ◽

Protein Fold ◽

Variable Parameters ◽

Protein Fold Recognition ◽

Evolutionary Features

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A machine learning information retrieval approach to protein fold recognition

Bioinformatics ◽

10.1093/bioinformatics/btl102 ◽

2006 ◽

Vol 22 (12) ◽

pp. 1456-1463 ◽

Author(s):

J. Cheng ◽

P. Baldi

Keyword(s):

Machine Learning ◽

Information Retrieval ◽

Fold Recognition ◽

Protein Fold ◽

Protein Fold Recognition

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Protein fold recognition using geometric kernel data fusion

Bioinformatics ◽

10.1093/bioinformatics/btu118 ◽

2014 ◽

Vol 30 (13) ◽

pp. 1850-1857 ◽

Author(s):

Pooya Zakeri ◽

Ben Jeuris ◽

Raf Vandebril ◽

Yves Moreau

Keyword(s):

Data Fusion ◽

Fold Recognition ◽

Protein Fold ◽

Protein Fold Recognition

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Application of Classifier Fusion for Protein Fold Recognition

2009 Sixth International Conference on Fuzzy Systems and Knowledge Discovery ◽

10.1109/fskd.2009.840 ◽

2009 ◽

Author(s):

Sahar Jazebi ◽

Amir Tohidi ◽

Masoud Rahgozar

Keyword(s):

Fold Recognition ◽

Classifier Fusion ◽

Protein Fold ◽

Protein Fold Recognition

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Ensemble of classifiers for protein fold recognition

Neurocomputing ◽

10.1016/j.neucom.2005.08.006 ◽

2006 ◽

Vol 69 (7-9) ◽

pp. 850-853 ◽

Author(s):

Loris Nanni

Keyword(s):

Fold Recognition ◽

Protein Fold ◽

Ensemble Of Classifiers ◽

Protein Fold Recognition

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K-local hyperplane distance nearest-neighbor algorithm and protein fold recognition

Pattern Recognition and Image Analysis ◽

10.1134/s1054661806010068 ◽

2006 ◽

Vol 16 (1) ◽

pp. 19-22 ◽

Author(s):

O. G. Okun

Keyword(s):

Nearest Neighbor ◽

Fold Recognition ◽

Protein Fold ◽

Nearest Neighbor Algorithm ◽

Protein Fold Recognition ◽

Local Hyperplane

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Protein Fold Recognition and Threading

Computational Structural Biology ◽

10.1142/9789812778789_0002 ◽

2008 ◽

pp. 37-60 ◽

Author(s):

L. J. McGuffin

Keyword(s):

Fold Recognition ◽

Protein Fold ◽

Protein Fold Recognition

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An Effective Feature Selection Algorithm Based on the Class Similarity Used with a SVM-RDA Classifier to Protein Fold Recognition

Lecture Notes in Computer Science - Hybrid Artificial Intelligent Systems ◽

10.1007/978-3-642-21222-2_25 ◽

2011 ◽

pp. 205-212

Author(s):

Wiesław Chmielnicki ◽

Katarzyna Sta̧por

Keyword(s):

Feature Selection ◽

Fold Recognition ◽

Protein Fold ◽

Selection Algorithm ◽

Feature Selection Algorithm ◽

Protein Fold Recognition

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Protein Fold Recognition by Combining Support Vector Machines and Pairwise Sequence Similarity Scores

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2020.2966450 ◽

2020 ◽

pp. 1-1 ◽

Author(s):

Ke Yan ◽

Jie Wen ◽

Jin-Xing Liu ◽

Yong Xu ◽

Bin Liu

Keyword(s):

Support Vector Machines ◽

Sequence Similarity ◽

Fold Recognition ◽

Support Vector ◽

Protein Fold ◽

Protein Fold Recognition ◽

Vector Machines ◽

Pairwise Sequence Similarity ◽

Similarity Scores

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A novel fusion based on the evolutionary features for protein fold recognition using support vector machines

Scientific Reports ◽

10.1038/s41598-020-71172-x ◽

2020 ◽

Vol 10 (1) ◽

Author(s):

Mohammad Saleh Refahi ◽

A. Mir ◽

Jalal A. Nasiri

Keyword(s):

Support Vector Machines ◽

Fold Recognition ◽

Support Vector ◽

Protein Fold ◽

Protein Fold Recognition ◽

Evolutionary Features ◽

Vector Machines

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