Estimating Conversion Factors for the Thymidine and Leucine Methods for Measuring Bacterial Production

Author(s):  
David L. Kirchman ◽  
Hugh W. Ducklow
2009 ◽  
Vol 75 (10) ◽  
pp. 3216-3221 ◽  
Author(s):  
Alejandra Calvo-D�az ◽  
Xos� Anxelu G. Mor�n

ABSTRACT Leucine-to-carbon conversion factors (CFs) are needed for converting substrate incorporation into biomass production of heterotrophic bacteria. During 2006 we performed 20 dilution experiments for determining the spatiotemporal variability of empirical CFs in temperate Atlantic coastal waters. Values (0.49 to 1.92 kg C mol Leu−1) showed maxima in autumn to early winter and minima in summer. Spatially averaged CFs were significantly negatively correlated with in situ leucine incorporation rates (r = −0.91) and positively correlated with phosphate concentrations (r = 0.76). These relationships, together with a strong positive covariation between cell-specific leucine incorporation rates and carbon contents (r = 0.85), were interpreted as a strategy to maximize survival through protein synthesis and low growth rates under nutrient limitation (low CFs) until favorable conditions stimulate cell division relative to protein synthesis (high CFs). A multiple regression with in situ leucine incorporation rates and cellular carbon contents explained 96% of CF variance in our ecosystem, suggesting their potential prediction from more easily measurable routine variables. The use of the theoretical CF of 1.55 kg C mol Leu−1 would have resulted in a serious overestimation (73%) of annual bacterial production rates. Our results emphasize the need for considering the temporal scale in CFs for bacterial production studies.


1994 ◽  
Vol 40 (5) ◽  
pp. 375-381 ◽  
Author(s):  
Richard A. Snyder ◽  
Richard D. Robarts ◽  
Douglas E. Caldwell

Vibrio alginolyticus, Vibrio logei, Vibrio natriegens, and Vibrio neries were grown in nutrient-limited continuous cultures at generation times (TD) of 5–135 h on complex media with cell yields of 0.8–12 × 106 bacteria/mL. Average cell volume, as determined by image analysis of video fluorescence microscopy, decreased for V. logei and V. neries, did not change for V. alginolyticus, and increased for V. natriegens with increasing TD. The increase in cell volume observed for V. natriegens was due to the development of filamentous cells. Batch cultures were grown on media with 10 times the nutrient concentration of continuous cultures. Tritiated thymidine incorporation was measured using phenol–chloroform extractions; leucine incorporation was measured in trichloroacetic acid precipitates. At concentrations of exogenous thymidine high enough to inhibit de novo synthesis of thymidine, the number of bacteria produced per mole of thymidine incorporated did not vary with changing generation time, or between batch and continuous cultures examined in this study. However, the number of bacteria produced per mole of leucine incorporated decreased per unit production with increasing TD for all four vibrios. A significant difference in the bacterial production conversion factor (bacteria produced per mole of label incorporated) for thymidine was found for V. neries relative to the three other Vibrio species, but no significant differences were found between growth conditions within species. Corrections for biovolume differences between species and growth rates reduced variability in conversion factors, and also yielded a significantly different conversion factor for V. neries. Conversion factors for leucine incorporation spanned three orders of magnitude, from 1015 to 1018 bacteria/mol of leucine incorporated.Key words: leucine, thymidine, bacterial production, chemostats.


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