Vertical feature pyramid networks

2021 ◽  
pp. 455-460
Author(s):  
Shivam Raj ◽  
Natasha Sebastian ◽  
Anil Singh Parihar
Keyword(s):  
Author(s):  
Sara Moccia ◽  
Maria Chiara Fiorentino ◽  
Emanuele Frontoni

Abstract Background and objectives Fetal head-circumference (HC) measurement from ultrasound (US) images provides useful hints for assessing fetal growth. Such measurement is performed manually during the actual clinical practice, posing issues relevant to intra- and inter-clinician variability. This work presents a fully automatic, deep-learning-based approach to HC delineation, which we named Mask-R$$^{2}$$ 2 CNN. It advances our previous work in the field and performs HC distance-field regression in an end-to-end fashion, without requiring a priori HC localization nor any postprocessing for outlier removal. Methods Mask-R$$^{2}$$ 2 CNN follows the Mask-RCNN architecture, with a backbone inspired by feature-pyramid networks, a region-proposal network and the ROI align. The Mask-RCNN segmentation head is here modified to regress the HC distance field. Results Mask-R$$^{2}$$ 2 CNN was tested on the HC18 Challenge dataset, which consists of 999 training and 335 testing images. With a comprehensive ablation study, we showed that Mask-R$$^{2}$$ 2 CNN achieved a mean absolute difference of 1.95 mm (standard deviation $$=\pm 1.92$$ = ± 1.92  mm), outperforming other approaches in the literature. Conclusions With this work, we proposed an end-to-end model for HC distance-field regression. With our experimental results, we showed that Mask-R$$^{2}$$ 2 CNN may be an effective support for clinicians for assessing fetal growth.


2020 ◽  
Vol 13 (1) ◽  
pp. 26
Author(s):  
Wen-Hao Su ◽  
Jiajing Zhang ◽  
Ce Yang ◽  
Rae Page ◽  
Tamas Szinyei ◽  
...  

In many regions of the world, wheat is vulnerable to severe yield and quality losses from the fungus disease of Fusarium head blight (FHB). The development of resistant cultivars is one means of ameliorating the devastating effects of this disease, but the breeding process requires the evaluation of hundreds of lines each year for reaction to the disease. These field evaluations are laborious, expensive, time-consuming, and are prone to rater error. A phenotyping cart that can quickly capture images of the spikes of wheat lines and their level of FHB infection would greatly benefit wheat breeding programs. In this study, mask region convolutional neural network (Mask-RCNN) allowed for reliable identification of the symptom location and the disease severity of wheat spikes. Within a wheat line planted in the field, color images of individual wheat spikes and their corresponding diseased areas were labeled and segmented into sub-images. Images with annotated spikes and sub-images of individual spikes with labeled diseased areas were used as ground truth data to train Mask-RCNN models for automatic image segmentation of wheat spikes and FHB diseased areas, respectively. The feature pyramid network (FPN) based on ResNet-101 network was used as the backbone of Mask-RCNN for constructing the feature pyramid and extracting features. After generating mask images of wheat spikes from full-size images, Mask-RCNN was performed to predict diseased areas on each individual spike. This protocol enabled the rapid recognition of wheat spikes and diseased areas with the detection rates of 77.76% and 98.81%, respectively. The prediction accuracy of 77.19% was achieved by calculating the ratio of the wheat FHB severity value of prediction over ground truth. This study demonstrates the feasibility of rapidly determining levels of FHB in wheat spikes, which will greatly facilitate the breeding of resistant cultivars.


2021 ◽  
Vol 10 (3) ◽  
pp. 168
Author(s):  
Peng Liu ◽  
Yongming Wei ◽  
Qinjun Wang ◽  
Jingjing Xie ◽  
Yu Chen ◽  
...  

Landslides are the most common and destructive secondary geological hazards caused by earthquakes. It is difficult to extract landslides automatically based on remote sensing data, which is import for the scenario of disaster emergency rescue. The literature review showed that the current landslides extraction methods mostly depend on expert interpretation which was low automation and thus was unable to provide sufficient information for earthquake rescue in time. To solve the above problem, an end-to-end improved Mask R-CNN model was proposed. The main innovations of this paper were (1) replacing the feature extraction layer with an effective ResNeXt module to extract the landslides. (2) Increasing the bottom-up channel in the feature pyramid network to make full use of low-level positioning and high-level semantic information. (3) Adding edge losses to the loss function to improve the accuracy of the landslide boundary detection accuracy. At the end of this paper, Jiuzhaigou County, Sichuan Province, was used as the study area to evaluate the new model. Results showed that the new method had a precision of 95.8%, a recall of 93.1%, and an overall accuracy (OA) of 94.7%. Compared with the traditional Mask R-CNN model, they have been significantly improved by 13.9%, 13.4%, and 9.9%, respectively. It was proved that the new method was effective in the landslides automatic extraction.


2021 ◽  
Author(s):  
Shuqi Xiong ◽  
Xiaohong Wu ◽  
Honggang Chen ◽  
Linbo Qing ◽  
Tong Chen ◽  
...  

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