Outline Based Geometric Morphometric Analysis in Describing Shape Variation in Suckermouth Armoured Catfishes (Pterygoplichthys spp.): Basis for the Development of Automated Species Identification System

2011 ◽  
Vol 61 (6) ◽  
pp. 688-702 ◽  
Author(s):  
Aida Gómez-Robles ◽  
María Martinón-Torres ◽  
José María Bermúdez de Castro ◽  
Leyre Prado-Simón ◽  
Juan Luis Arsuaga

2013 ◽  
Vol 47 (1) ◽  
pp. 15-23 ◽  
Author(s):  
Christopher M. Murray ◽  
Kyle R. Piller ◽  
Mark Merchant ◽  
Amos Cooper ◽  
Michael E. Easter

2020 ◽  
Vol 68 (1) ◽  
Author(s):  
María José Miranda

Introduction: The gastropod Bostryx torallyi shows high variability in shell shape and coloration. Subspecies of this organism have been described based on shell characters but, since they were slightly different, they were synonymized afterwards. Until now, shell variability has been analyzed only descriptively and its anatomy is still unknown. Objective: In this study, I provide anatomical information of B. torallyi and apply a geometric morphometric analysis to evaluate the shell shape variation among specimens. Methods: To accomplish this, type material and numerous lots were examined and dissected out. Additionally, relative warp analysis, based on 9 landmarks in ventral view of the shell, was performed using 80 specimens of 9 localities from Bolivia and Argentina. Results: According to our results, geometric morphometrics is a suitable method to evaluate differences in shell shape among localities; for instance, distinctions in the shell were noticeable between gastropods of low and high altitudes. On the other hand, it was established that the coloration of this species is independent of large-scale factors since the examined specimens came from environments with similar conditions. Furthermore, the sculpture of the protoconch and anatomy of B. torallyi coincided with the other Argentinian species of the genus. Conclusions: Therefore, I concluded that a geometric morphometric analysis of shell shape is a good complement to traditional qualitative description of the characteristics of the shell in this species.


PLoS ONE ◽  
2021 ◽  
Vol 16 (8) ◽  
pp. e0250477
Author(s):  
Alexander Ordynets ◽  
Sarah Keßler ◽  
Ewald Langer

Morphology of organisms is an essential source of evidence for taxonomic decisions and understanding of ecology and evolutionary history. The geometric structure (i.e., numeric description of shape) provides richer and mathematically different information about an organism’s morphology than linear measurements. A little is known on how these two sources of morphological information (shape vs. size) contribute to the identification of organisms when implied simultaneously. This study hypothesized that combining geometric information on the outline with linear measurements results in better species identification than either evidence alone can provide. As a test system for our research, we used the microscopic spores of fungi from the genus Subulicystidium (Agaricomycetes, Basidiomycota). We analyzed 2D spore shape data via elliptic Fourier and principal component analyses. Using flexible discriminant analysis, we achieved the highest species identification success rate for a combination of shape and size descriptors (64.7%). The shape descriptors alone predicted species slightly better than size descriptors (61.5% vs. 59.1%). We conclude that adding geometric information on the outline to linear measurements improves the identification of the organisms. Despite the high relevance of spore traits for the taxonomy of fungi, they were previously rarely analyzed with the tools of geometric morphometrics. Therefore, we supplement our study with an open access protocol for digitizing and summarizing fungal spores’ shape and size information. We propagate a broader use of geometric morphometric analysis for microscopic propagules of fungi and other organisms.


Sign in / Sign up

Export Citation Format

Share Document