scholarly journals A Model Selection Approach for the Identification of Quantitative Trait Loci in Experimental Crosses, Allowing Epistasis

Genetics ◽  
2008 ◽  
Vol 181 (3) ◽  
pp. 1077-1086 ◽  
Author(s):  
Ani Manichaikul ◽  
Jee Young Moon ◽  
Śaunak Sen ◽  
Brian S. Yandell ◽  
Karl W. Broman
Keyword(s):  
Quantitative Trait Loci ◽  
Model Selection ◽  
Quantitative Trait ◽  
Model Selection Approach ◽  
Selection Approach ◽  
Trait Loci ◽  
Experimental Crosses

scholarly journals A Model Selection Approach for Expression Quantitative Trait Loci (eQTL) Mapping

Genetics ◽  
2010 ◽  
Vol 187 (2) ◽  
pp. 611-621 ◽  
Author(s):  
Ping Wang ◽  
John A. Dawson ◽  
Mark P. Keller ◽  
Brian S. Yandell ◽  
Nancy A. Thornberry ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Model Selection ◽  
Quantitative Trait ◽  
Expression Quantitative Trait Loci ◽  
Eqtl Mapping ◽  
Model Selection Approach ◽  
Selection Approach ◽  
Trait Loci

scholarly journals An Efficient Bayesian Model Selection Approach for Interacting Quantitative Trait Loci Models With Many Effects

Genetics ◽  
2007 ◽  
Vol 176 (3) ◽  
pp. 1865-1877 ◽  
Author(s):  
Nengjun Yi ◽  
Daniel Shriner ◽  
Samprit Banerjee ◽  
Tapan Mehta ◽  
Daniel Pomp ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Model Selection ◽  
Quantitative Trait ◽  
Bayesian Model ◽  
Bayesian Model Selection ◽  
Model Selection Approach ◽  
Selection Approach ◽  
Trait Loci ◽  
Bayesian Model Selection Approach

A new Bayesian automatic model selection approach for mapping quantitative trait loci under variance component model

Genetica ◽  
2008 ◽  
Vol 135 (3) ◽  
pp. 429-437 ◽  
Author(s):  
Ming Fang ◽  
Dan Jiang ◽  
Huijiang Gao ◽  
Dongxiao Sun ◽  
Runqing Yang ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Model Selection ◽  
Quantitative Trait ◽  
Variance Component ◽  
Component Model ◽  
Variance Component Model ◽  
Automatic Model Selection ◽  
Model Selection Approach ◽  
Selection Approach ◽  
Trait Loci

scholarly journals On the Detection of Imprinted Quantitative Trait Loci in Experimental Crosses of Outbred Species

Genetics ◽  
2002 ◽  
Vol 161 (2) ◽  
pp. 931-938
Author(s):  
Dirk-Jan de Koning ◽  
Henk Bovenhuis ◽  
Johan A M van Arendonk
Keyword(s):  
Quantitative Trait Loci ◽  
Simulation Study ◽  
Quantitative Trait ◽  
Statistical Properties ◽  
Imprinted Genes ◽  
Quantitative Genetic ◽  
Trait Loci ◽  
Experimental Crosses

Abstract In this article, the quantitative genetic aspects of imprinted genes and statistical properties of methods to detect imprinted QTL are studied. Different models to detect imprinted QTL and to distinguish between imprinted and Mendelian QTL were compared in a simulation study. Mendelian and imprinted QTL were simulated in an F2 design and analyzed under Mendelian and imprinting models. Mode of expression was evaluated against the H0 of a Mendelian QTL as well as the H0 of an imprinted QTL. It was shown that imprinted QTL might remain undetected when analyzing the genome with Mendelian models only. Compared to testing against a Mendelian QTL, using the H0 of an imprinted QTL gave a higher proportion of correctly identified imprinted QTL, but also gave a higher proportion of false inference of imprinting for Mendelian QTL. When QTL were segregating in the founder lines, spurious detection of imprinting became more prominent under both tests, especially for designs with a small number of F1 sires.

scholarly journals Bayesian Model Selection for Genome-Wide Epistatic Quantitative Trait Loci Analysis

Genetics ◽  
2005 ◽  
Vol 170 (3) ◽  
pp. 1333-1344 ◽  
Author(s):  
Nengjun Yi ◽  
Brian S. Yandell ◽  
Gary A. Churchill ◽  
David B. Allison ◽  
Eugene J. Eisen ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Model Selection ◽  
Quantitative Trait ◽  
Bayesian Model ◽  
Bayesian Model Selection ◽  
Genome Wide ◽  
Trait Loci ◽  
Selection For

scholarly journals Joint tests for quantitative trait loci in experimental crosses

2004 ◽  
Vol 36 (6) ◽  
pp. 601 ◽  
Author(s):  
T Mark Beasley ◽  
Dongyan Yang ◽  
Nengjun Yi ◽  
Daniel C Bullard ◽  
Elizabeth L Travis ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Quantitative Trait ◽  
Trait Loci ◽  
Experimental Crosses

Model selection in irregular problems: Applications to mapping quantitative trait loci

Biometrika ◽  
2004 ◽  
Vol 91 (4) ◽  
pp. 785-800 ◽  
Author(s):  
D. Siegmund
Keyword(s):  
Quantitative Trait Loci ◽  
Model Selection ◽  
Quantitative Trait ◽  
Trait Loci

Locating multiple interacting quantitative trait loci using robust model selection

2007 ◽  
Vol 51 (12) ◽  
pp. 6423-6434 ◽  
Author(s):  
Andreas Baierl ◽  
Andreas Futschik ◽  
Małgorzata Bogdan ◽  
Przemysław Biecek
Keyword(s):  
Quantitative Trait Loci ◽  
Model Selection ◽  
Quantitative Trait ◽  
Robust Model ◽  
Trait Loci ◽  
Robust Model Selection
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