scholarly journals Characterization of the complete mitochondrial genome and a set of polymorphic microsatellite markers through next-generation sequencing for the brown brocket deer Mazama gouazoubira

2015 ◽  
Vol 38 (3) ◽  
pp. 338-345 ◽  
Author(s):  
Renato Caparroz ◽  
Aline M.B. Mantellatto ◽  
David J. Bertioli ◽  
Marina G. Figueiredo ◽  
José Maurício B. Duarte
Keyword(s):  
Next Generation Sequencing ◽  
Mitochondrial Genome ◽  
Microsatellite Markers ◽  
Complete Mitochondrial Genome ◽  
Next Generation ◽  
Mazama Gouazoubira ◽  
Polymorphic Microsatellite ◽  
Generation Sequencing ◽  
Brocket Deer

scholarly journals Development and Characterization of 68 Microsatellite Markers of Black Amur Bream Megalobrama terminalis by Next-Generation Sequencing

2021 ◽  
Vol 21 (06) ◽  
pp. 299-308
Author(s):  
Kai Liu ◽  
Xiao-yu Feng ◽  
Heng-jia Ma ◽  
Nan Xie
Keyword(s):  
Linkage Disequilibrium ◽  
Next Generation Sequencing ◽  
Microsatellite Markers ◽  
Polymorphism Information Content ◽  
Next Generation ◽  
Expected Heterozygosity ◽  
Hardy Weinberg Equilibrium ◽  
Polymorphic Microsatellite ◽  
Generation Sequencing

This study developed and characterized 68 novel polymorphic microsatellite markers from black Amur bream Megalobrama terminalis by next-generation sequencing. Variability was tested on 36 individuals collected from Qiantang River, Zhejiang Province, China. The number of alleles per locus ranged from 2 to 13. Observed heterozygosity ranged from 0.028 to 0.944, whereas the expected heterozygosity ranged from 0.028 to 0.887. Polymorphism Information Content ranged from 0.027 to 0.862. Moreover, 53 microsatellites were in agreement with Hardy–Weinberg equilibrium. Twenty-eight pairwise tests in 33 microsatellite loci indicated linkage disequilibrium. These microsatellites are a valuable tool for further genetics studies of this species.

scholarly journals Next-generation sequencing yields complete mitochondrial genome assembly of peaceful betta fish, Betta imbellis (Teleostei: Osphronemidae)

2020 ◽  
Vol 5 (4) ◽  
pp. 3856-3858
Author(s):  
Syed Farhan Ahmad ◽  
Nararat Laopichienpong ◽  
Worapong Singchat ◽  
Aorarat Suntronpong ◽  
Tavun Pongsanarm ◽  
...  
Keyword(s):  
Next Generation Sequencing ◽  
Mitochondrial Genome ◽  
Genome Assembly ◽  
Complete Mitochondrial Genome ◽  
Next Generation ◽  
Generation Sequencing
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