scholarly journals Prediction of BRCA Gene Mutation Status in Epithelial Ovarian Cancer by Radiomics Models based on 2D and 3D CT Images

Author(s):  
mingzhu liu ◽  
yaqiong ge ◽  
mengru li ◽  
wei wei

Abstract Background The objective of this study is to explore the value of two-dimensional (2D) and three-dimensional (3D) radiomics models based on enhanced computed tomography(CT) images in predicting BRCA gene mutations in patients with epithelial ovarian cancer. Methods A retrospective analysis of the clinical and imaging data of 122 patients with ovarian cancer confirmed by surgery and pathology and on which genetic testing was performed. Radiomics features were extracted from the 2D and 3D regions of interest of the patients’ primary tumor lesions, and features were selected in the training set using the maximum correlation and minimum redundancy method. Then, the best features were selected through Lasso 10-fold cross-validation. Feature subsets were used to establish a radiomics model. We used area under the receiver operating characteristic curve analysis to evaluate the model’s performance and then used the model’s decision curve to evaluate its clinical validity. Results On the validation set, the area under the curve values of the 2D, 3D, and 2D+3D combined models was 0.78 (0.61–0.96), 0.75 (0.55–0.92), and 0.82 (0.61–0.96), respectively. However, the DeLong test P values between the three pairs of models were all >0.05. The decision curve analysis showed that the radiomics model had a high net benefit across all high-risk threshold probabilities. Conclusions The three radiomics models can predict the BRCA gene mutation in ovarian cancer, and there were no statistically significant differences between the three models’ prediction performance.

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Liu Mingzhu ◽  
Ge Yaqiong ◽  
Li Mengru ◽  
Wei Wei

Abstract Background The objective of this study is to explore the value of two-dimensional (2D) and three-dimensional (3D) radiomics models based on enhanced computed tomography (CT) images in predicting BRCA gene mutations in patients with epithelial ovarian cancer. Methods The clinical and imaging data of 106 patients with ovarian cancer confirmed by surgery and pathology were retrospectively analyzed and genetic testing was performed. Radiomics features extracted from the 2D and 3D regions of interest of the patients’ primary tumor lesions were selected in the training set using the maximum correlation and minimum redundancy method. Then, the best features were selected through Lasso tenfold cross-validation. Feature subsets were employed to establish a radiomics model. The model’s performance was evaluated via area under the receiver operating characteristic curve analysis and its clinical validity was assessed by using the model’s decision curve. Results On the validation set, the area under the curve values of the 2D, 3D, and 2D + 3D combined models were 0.78 (0.61–0.96), 0.75 (0.55–0.92), and 0.82 (0.61–0.96), respectively. However, the DeLong test P values between the three pairs of models were all > 0.05. The decision curve analysis showed that the radiomics model had a high net benefit across all high-risk threshold probabilities. Conclusions The three radiomics models can predict the BRCA gene mutation in ovarian cancer, and there were no statistically significant differences between the prediction performance of the three models.


2019 ◽  
Vol 154 (1) ◽  
pp. e29 ◽  
Author(s):  
S. Spragg ◽  
M. Ciccone ◽  
E. Blake ◽  
C. Ricker ◽  
H. Pham ◽  
...  

2018 ◽  
Vol 25 ◽  
pp. 98-101 ◽  
Author(s):  
Koji Matsuo ◽  
Samantha E. Spragg ◽  
Marcia A. Ciccone ◽  
Erin A. Blake ◽  
Charité Ricker ◽  
...  

2020 ◽  
Vol 256 ◽  
pp. 267-271
Author(s):  
Rachel Caskey ◽  
Brandon Singletary ◽  
Kareen Ayre ◽  
Catherine Parker ◽  
Helen Krontiras ◽  
...  

2018 ◽  
Vol 14 ◽  
pp. 174550571775069 ◽  
Author(s):  
Maurie Markman

There is considerable interest and enthusiasm within the clinical gynecologic oncology community regarding the potential for poly (ADP-ribose) polymerase inhibitors to play a critically relevant role in the management of epithelial ovarian cancer and particularly (although not exclusively) in the setting of known mutations in the BRCA gene. This review will briefly highlight the biological rational for the use of poly (ADP-ribose) polymerase inhibitors in this malignancy, followed by summary of currently available clinical data supporting the delivery of agents approved by the US Food and Drug Administration for non-investigative use.


2016 ◽  
Vol 36 ◽  
pp. S53
Author(s):  
J. Long ◽  
T. Evans ◽  
D. Bailey ◽  
M. Lewis ◽  
K. Gower-Thomas ◽  
...  

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