1P034 Conformational sampling of HP1 chromodomain/histone H3 tail complex(Protein: Structure & Function,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Hashiguchi Nobuto; Omori Satoshi; Moritsugu Kei; Nishimura Yoshifumi; Kidera Akinori

doi:10.2142/biophys.54.s146_4

1P034 Conformational sampling of HP1 chromodomain/histone H3 tail complex(Protein: Structure & Function,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s146_4 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S146

Author(s):

Hashiguchi Nobuto ◽

Omori Satoshi ◽

Moritsugu Kei ◽

Nishimura Yoshifumi ◽

Kidera Akinori

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Histone H3 ◽

Conformational Sampling ◽

Biophysical Society ◽

Complex Protein

Download Full-text

1P042 Replica-exchange simulation of N-ter fragment in HP1 chromodomain and model construction of HP1αCD/histone H3 tail complex(01B. Protein : Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s147_6 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S147

Author(s):

Satoshi Omori ◽

Nobuto Hashiguchi ◽

Kei Moritsugu ◽

Yoshifumi Nishimura ◽

Akinori Kidera

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Histone H3 ◽

Model Construction ◽

Replica Exchange ◽

Biophysical Society

Download Full-text

1P021 Enhanced conformational sampling methods for extracting biological rare events of proteins(Protein: Structure & Function,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s144_3 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S144

Author(s):

Harada Ryuhei ◽

Takano Yu ◽

Shigeta Yasuteru

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Sampling Methods ◽

Rare Events ◽

Conformational Sampling ◽

Biophysical Society

Download Full-text

1P037 Integrated Hamiltonian Sampling: towards efficient free energy calculation and conformational sampling(01B. Protein : Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s147_1 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S147

Author(s):

Toshifumi Mori ◽

Qiang Cui

Keyword(s):

Free Energy ◽

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Free Energy Calculation ◽

Conformational Sampling ◽

Energy Calculation ◽

Biophysical Society

Download Full-text

1P038 Full-scale conformational sampling of K63 and linear polyubiquitins(01B. Protein : Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s147_2 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S147

Author(s):

Masanori Shimizu ◽

Hafumi Nishi ◽

Kei Moritsugu ◽

Akinori Kidera

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Full Scale ◽

Conformational Sampling ◽

Biophysical Society

Download Full-text

2P034 High-speed AFM observation of structure and function of MukB(01B. Protein: Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s200_4 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S200

Author(s):

Kenta Yagi ◽

Koichi Yano ◽

Noriyuki Kodera ◽

Hironori Niki ◽

Toshio Ando

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

High Speed ◽

Structure And Function ◽

Biophysical Society ◽

And Function ◽

Afm Observation

Download Full-text

1P029 The role of weak interaction in a blue copper protein, plastocyanin from Ulva pertusa(Protein: Structure & Function,Poster,The 52th Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s145_5 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S145

Author(s):

Ikeda Soichiro ◽

Takashina Akiko ◽

Yamaguchi Takahide ◽

Aoki Risa ◽

Unno Masaki ◽

...

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Weak Interaction ◽

Ulva Pertusa ◽

Blue Copper Protein ◽

Blue Copper ◽

Copper Protein ◽

Biophysical Society

Download Full-text

3P047 Building an Artificial Protein Capsid(01B. Protein: Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s256_5 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S256

Author(s):

Jonathan Heddle

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Biophysical Society ◽

Artificial Protein

Download Full-text

2P025 Structural insight into the heme-transfer mechanism between Isd proteins in Staphylococcus aureus(01B. Protein: Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s199_1 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S199

Author(s):

Yoshitaka Moriwaki ◽

Tohru Terada ◽

Jose M. M. Caaveiro ◽

Kouhei Tsumoto ◽

Kentaro Shimizu

Keyword(s):

Staphylococcus Aureus ◽

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Transfer Mechanism ◽

Biophysical Society ◽

Heme Transfer ◽

Structural Insight ◽

Insight Into

Download Full-text

3P042 Atomic-level observation of how ATP-binding influences the structural and solvation state of myosin(Protein: Structure & Function,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s152_3 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S152

Author(s):

Takato Sato ◽

Jun Ohnuki ◽

Kei-ichi Okazaki ◽

Mitsunori Takano

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Atomic Level ◽

Atp Binding ◽

Solvation State ◽

Biophysical Society

Download Full-text

1P041 The study on aEF-2 recognition mechanism of ribosomal stalk(01B. Protein : Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s147_5 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S147

Author(s):

Takehito Tanzawa ◽

Yuki Kumakura ◽

Yoshikazu Tanaka ◽

Toshio Uchiumi ◽

Isao Tanaka ◽

...

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Recognition Mechanism ◽

Biophysical Society ◽

Ribosomal Stalk

Download Full-text