Longer DNA exhibits greater potential for cell-free gene expression

Cell-free gene expression systems have been valuable tools for understanding how transcription/translation can be regulated in living cells. Many studies have investigated the determining factors that affect gene expression. Here we report the effect of the length of linearized reporter DNAs encoding the firefly luciferase gene so as to exclude the influence of supercoiling. It is found that longer DNA molecules exhibit significantly greater potency in gene expression; for example, the expression level for DNA with 25.7 kbp is 1000-times higher than that for DNA of 1.7 kbp. AFM observation of the DNA conformation indicates that longer DNA takes shrunken conformation with a higher segment density in the reaction mixture for gene expression, in contrast to the stiff conformation of shorter DNA. We propose an underlying mechanism for the favorable effect of longer DNA on gene expression in terms of the enhancement of access of RNA polymerase to the shrunken conformation. It is expected that the enhancement of gene expression efficiency with a shrunken DNA conformation would also be a rather general mechanism in living cellular environments.

AFM Observation of Etch-Pit Shapes on β-Ga2O3 (001) Surface Formed by Molten Alkali Etching

In order to understand the crystal defects of beta-gallium oxide (β-Ga2O3) in more detail, we classified the crystal defects of a 2-inch substrate of β-Ga2O3 (001) single crystal. As a result of observing the etch pits formed by molten alkali etching using scanning electron microscope (SEM) and atomic force microscope (AFM), we succeeded in observing six different etch pit shapes. These etch pit shapes are categorized into “Cicada I type”, “Cicada II type”, “Cannonball type”, “Trapezoid type”, “Bar type”, and “Shell type”. We consider that “Cicada I type” and “Cicada II type” are etch pit shapes caused by planar defects, and “Cannon ball type” is etch pit shapes due to dislocations. In addition, “Trapezoid type”, “Bar type”, and “Shell type” are deduced the result of surface morphology.

Preparation and characterization of electrodeposited Ni-Ru alloys: morphological and catalytic study

Nickel-ruthenium alloys with various compositions have been deposited by electrodeposition for the first time. Cyclic voltammetry and linear stripping voltammetry measurements show that codeposition of nickel with ruthenium is possible below the potential value of nickel reduction. High-quality alloys containing nickel and ruthenium can be plated at cathodic potentials ranging from − 0.5 to − 1.0 V vs SCE. Deposited coatings were characterized by X-ray diffraction (XRD), scanning electron microscopy (SEM), and atomic force microscopy (AFM). The diffractograms obtained show that an increase of nickel concentration in alloy will lead to a change in the phase composition and formation of NiRu (100) and (101) phases which is observed to be 78 mas.% Ni. SEM studies confirm the surface homogeneity and presence of small, regular grains. AFM observation allows the estimation of the real surface area of obtained alloys which increase with more negative electrodeposition potentials. Ni-Ru alloys were found to be highly electroactive in the water splitting process, which can be connected with the presence of the NiRu phase and a well-developed electroactive area.