scholarly journals Functional Constraints and rbcL Evidence for Land Plant Phylogeny

1994 ◽  
Vol 81 (3) ◽  
pp. 534 ◽  
Author(s):  
Victor A. Albert ◽  
Anders Backlund ◽  
Kare Bremer ◽  
Mark W. Chase ◽  
James R. Manhart ◽  
...  
2007 ◽  
Vol 168 (5) ◽  
pp. 691-708 ◽  
Author(s):  
Yin‐Long Qiu ◽  
Libo Li ◽  
Bin Wang ◽  
Zhiduan Chen ◽  
Olena Dombrovska ◽  
...  

1997 ◽  
Vol 75 (10) ◽  
pp. 1728-1738 ◽  
Author(s):  
Angel R. Maden ◽  
Karen Sue Renzaglia ◽  
Dean P. Whittier ◽  
David J. Garbary

The spermatozoid of Lycopodiella lateralis (R. Br.) B. Øllgaard is ovoid and biflagellated and contains little cytoplasm. A large, rounded, condensed nucleus occupies the central region of the cell. At the rear of the cell is a cluster of starch-containing plastids associated with numerous elongated mitochondria and small pockets of remnant cytoplasm. The multilayered structure coils laterally around the cell anterior for just over one revolution. An anterior mitochondrion underlies the multilayered structure over its entire length and several smaller mitochondria line the inner anterior coil. Some 150 spline microtubules extend from the multilayered structure and coil posteriorly at approximately a 45° angle to the longitudinal axis of the cell. Microtubules progressively increase in length from the margins of the multilayered structure to the center and thus only a central core of approximately 30 microtubules encircles the organelles at the base of the cell. The two basal bodies are parallel and staggered in their position over the multilayered structure and are separated by about 80° around the circumference of the cell anterior. The flagella emerge in parallel and coil for nearly two revolutions. Comparisons among Lycopodiella, Palhinhaea, and Lycopodium provide the basis for evolutionary inferences associated with modifications in spermatozoid structure such as changes in cell size, whole cell coiling, and distance between basal bodies. Phylogenetic analysis of male gametogenesis suggests that Lycopodiella is part of a monophyletic lycopsid assemblage near the base of the vascular plants. Within this clade, Lycopodiella is most closely related to Palhinhaea, with Lycopodium, Phylloglossum, and Selaginella forming a sister clade. Key words: Lycopodiella, Lycopodium, spermatozoid, land plant phylogeny, locomotory apparatus, ultrastructure.


2019 ◽  
Vol 24 (10) ◽  
pp. 947-958 ◽  
Author(s):  
Jorge Gago ◽  
Marc Carriquí ◽  
Miquel Nadal ◽  
María José Clemente-Moreno ◽  
Rafael Eduardo Coopman ◽  
...  

Science ◽  
2015 ◽  
Vol 347 (6222) ◽  
pp. 621.3-621 ◽  
Author(s):  
Samuel F. Brockington ◽  
Edwige Moyroud ◽  
Camille Sayou ◽  
Marie Monniaux ◽  
Max H. Nanao ◽  
...  

Brunkard et al. propose that the identification of novel LEAFY sequences contradicts our model of evolution through promiscuous intermediates. Based on the debate surrounding land plant phylogeny and on our analysis of these interesting novel sequences, we explain why there is no solid evidence to disprove our model.


1994 ◽  
Vol 72 (1) ◽  
pp. 65-72 ◽  
Author(s):  
Karen Sue Renzaglia ◽  
Roy C. Brown ◽  
Betty E. Lemmon ◽  
Jeffrey G. Duckett ◽  
Roberto Ligrone

Monoplastidic meiosis is reported for the first time in three seemingly unrelated liverworts, namely Blasia pusilla (Metzgeriales), Monoclea gottschei (Monocleales), and Haplomitrium blumei (Haplomitriales). A second species of Haplomitrium, H. hookeri, is polyplastidic as previously reported. All three taxa represent isolated relicts of ancient liverwort lineages. Monoplastidy in these hepatics is evident in archesporial tissue and is maintained through successive sporogenous cell generations. In archesporial mitosis, the single plastid divides and the two resultant plastids are precisely positioned so that one is inherited by each daughter cell. In the nascent spore mother cell, the solitary plastid undergoes two successive divisions and the resulting four plastids become positioned in a tetrahedral arrangement. Concomitantly, the sporocyte assumes a quadrilobed shape, which is less exaggerated in Monoclea, and a single large plastid is situated in each lobe. Details of plastid ultrastructure and morphology vary slightly among the three taxa. Evidence is presented that Blasia and Monoclea share a common ancestry and represent pivotal taxa in the evolution of the two main lines of liverworts. Haplomitrium is suggested to occupy a more basal position in bryophyte phylogeny. Monoplastidy in meiosis of liverworts links the charophytes, the three bryophyte clades, and the lycopsid pteridophytes and supports a monophyletic interpretation of land plant phylogeny. Key words: chloroplast, liverwort, meiosis, monoplastidy, phylogeny, sporogenesis.


PeerJ ◽  
2020 ◽  
Vol 8 ◽  
pp. e8995 ◽  
Author(s):  
Filipe Sousa ◽  
Peter Civáň ◽  
João Brazão ◽  
Peter G. Foster ◽  
Cymon J. Cox

Congruence among analyses of plant genomic data partitions (nuclear, chloroplast and mitochondrial) is a strong indicator of accuracy in plant molecular phylogenetics. Recent analyses of both nuclear and chloroplast genome data of land plants (embryophytes) have, controversially, been shown to support monophyly of both bryophytes (mosses, liverworts, and hornworts) and tracheophytes (lycopods, ferns, and seed plants), with mosses and liverworts forming the clade Setaphyta. However, relationships inferred from mitochondria are incongruent with these results, and typically indicate paraphyly of bryophytes with liverworts alone resolved as the earliest-branching land plant group. Here, we reconstruct the mitochondrial land plant phylogeny from a newly compiled data set. When among-lineage composition heterogeneity is accounted for in analyses of codon-degenerate nucleotide and amino acid data, the clade Setaphyta is recovered with high support, and hornworts are supported as the earliest-branching lineage of land plants. These new mitochondrial analyses demonstrate partial congruence with current hypotheses based on nuclear and chloroplast genome data, and provide further incentive for revision of how plants arose on land.


2000 ◽  
Vol 355 (1398) ◽  
pp. 769-793 ◽  
Author(s):  
Karen Sue Renzaglia ◽  
R. Joel Duff ◽  
Daniel L. Nickrent ◽  
David J. Garbary

As the oldest extant lineages of land plants, bryophytes provide a living laboratory in which to evaluate morphological adaptations associated with early land existence. In this paper we examine reproductive and structural innovations in the gametophyte and sporophyte generations of hornworts, liverworts, mosses and basal pteridophytes. Reproductive features relating to spermatogenesis and the architecture of motile male gametes are overviewed and evaluated from an evolutionary perspective. Phylogenetic analyses of a data set derived from spermatogenesis and one derived from comprehensive morphogenetic data are compared with a molecular analysis of nuclear and mitochondrial small subunit rDNA sequences. Although relatively small because of a reliance on water for sexual reproduction, gametophytes of bryophytes are the most elaborate of those produced by any land plant. Phenotypic variability in gametophytic habit ranges from leafy to thalloid forms with the greatest diversity exhibited by hepatics. Appendages, including leaves, slime papillae and hairs, predominate in liverworts and mosses, while hornwort gametophytes are strictly thalloid with no organized external structures. Internalization of reproductive and vegetative structures within mucilage–filled spaces is an adaptive strategy exhibited by hornworts. The formative stages of gametangial development are similar in the three bryophyte groups, with the exception that in mosses apical growth is intercalated into early organogenesis, a feature echoed in moss sporophyte ontogeny. A monosporangiate, unbranched sporophyte typifies bryophytes, but developmental and structural innovations suggest the three bryophyte groups diverged prior to elaboration of this generation. Sporophyte morphogenesis in hornworts involves non–synchronized sporogenesis and the continued elongation of the single sporangium, features unique among archegoniates. In hepatics, elongation of the sporophyte seta and archegoniophore is rapid and requires instantaneous wall expandability and hydrostatic support. Unicellular, spiralled elaters and capsule dehiscence through the formation of four regular valves are autapomorphies of liverworts. Sporophytic sophistications in the moss clade include conducting tissue, stomata, an assimilative layer and an elaborate peristome for extended spore dispersal. Characters such as stomata and conducting cells that are shared among sporophytes of mosses, hornworts and pteridophytes are interpreted as parallelisms and not homologies. Our phylogenetic analysis of three different data sets is the most comprehensive to date and points to a single phylogenetic solution for the evolution of basal embryophytes. Hornworts are supported as the earliest divergent embryophyte clade with a moss/liverwort clade sister to tracheophytes. Among pteridophytes, lycophytes are monophyletic and an assemblage containing ferns, Equisetum and psilophytes is sister to seed plants. Congruence between morphological and molecular hypotheses indicates that these data sets are tracking the same phylogenetic signal and reinforces our phylogenetic conclusions. It appears that total evidence approaches are valuable in resolving ancient radiations such as those characterizing the evolution of early embryophytes. More information on land plant phylogeny can be found at: http://www.science.siu.edu/landplants/index.html.


2019 ◽  
Vol 47 (18) ◽  
pp. 9842-9856 ◽  
Author(s):  
Petr Fajkus ◽  
Vratislav Peška ◽  
Michal Závodník ◽  
Miloslava Fojtová ◽  
Jana Fulnečková ◽  
...  

Abstract To elucidate the molecular nature of evolutionary changes of telomeres in the plant order Asparagales, we aimed to characterize telomerase RNA subunits (TRs) in these plants. The unusually long telomere repeat unit in Allium plants (12 nt) allowed us to identify TRs in transcriptomic data of representative species of the Allium genus. Orthologous TRs were then identified in Asparagales plants harbouring telomere DNA composed of TTAGGG (human type) or TTTAGGG (Arabidopsis-type) repeats. Further, we identified TRs across the land plant phylogeny, including common model plants, crop plants, and plants with unusual telomeres. Several lines of functional testing demonstrate the templating telomerase function of the identified TRs and disprove a functionality of the only previously reported plant telomerase RNA in Arabidopsis thaliana. Importantly, our results change the existing paradigm in plant telomere biology which has been based on the existence of a relatively conserved telomerase reverse transcriptase subunit (TERT) associating with highly divergent TRs even between closely related plant taxa. The finding of a monophyletic origin of genuine TRs across land plants opens the possibility to identify TRs directly in transcriptomic or genomic data and/or predict telomere sequences synthesized according to the respective TR template region.


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