scholarly journals Editorial: Peptidyl-Prolyl Isomerases in Human Pathologies

2019 ◽  
Vol 10 ◽  
Author(s):  
Tiziano Tuccinardi ◽  
Flavio Rizzolio
2015 ◽  
Vol 9 (2) ◽  
pp. 165-179 ◽  
Author(s):  
Lana McClements ◽  
Stephanie Annett ◽  
Anita Yakkundi ◽  
Tracy Robson

Peptides 1990 ◽  
1991 ◽  
pp. 808-810
Author(s):  
Daniel H. Rich ◽  
C. Q. Sun ◽  
J. Kofron ◽  
B. E. Dunlap ◽  
V. Kishore

1995 ◽  
Vol 2 (4) ◽  
pp. 353-356
Author(s):  
Akira Tsugita ◽  
Yoshio Ueno ◽  
Kiyoshi Tabuchi ◽  
Lu-Ping Chow ◽  
Yoshitsugu Sugiura ◽  
...  

2018 ◽  
Vol 115 (39) ◽  
pp. 9744-9749 ◽  
Author(s):  
Christopher A. Waudby ◽  
Tomasz Wlodarski ◽  
Maria-Evangelia Karyadi ◽  
Anaïs M. E. Cassaignau ◽  
Sammy H. S. Chan ◽  
...  

Cotranslational folding (CTF) is a fundamental molecular process that ensures efficient protein biosynthesis and minimizes the formation of misfolded states. However, the complexity of this process makes it extremely challenging to obtain structural characterizations of CTF pathways. Here, we correlate observations of translationally arrested nascent chains with those of a systematic C-terminal truncation strategy. We create a detailed description of chain length-dependent free energy landscapes associated with folding of the FLN5 filamin domain, in isolation and on the ribosome, and thus, quantify a substantial destabilization of the native structure on the ribosome. We identify and characterize two folding intermediates formed in isolation, including a partially folded intermediate associated with the isomerization of a conserved cis proline residue. The slow folding associated with this process raises the prospect that neighboring unfolded domains might accumulate and misfold during biosynthesis. We develop a simple model to quantify the risk of misfolding in this situation and show that catalysis of folding by peptidyl-prolyl isomerases is sufficient to eliminate this hazard.


2014 ◽  
Vol 2014 ◽  
pp. 1-9 ◽  
Author(s):  
Fei Liu ◽  
Xiao-Long Wei ◽  
Hao Li ◽  
Ji-Fu Wei ◽  
Yong-Qing Wang ◽  
...  

FK506 binding proteins (FKBPs) belong to immunophilins with peptidyl-prolyl isomerases (PPIases) activity. FKBP25 (also known as FKBP3) is one of the nuclear DNA-binding proteins in the FKBPs family, which plays an important role in regulating transcription and chromatin structure. The calculation of nonsynonymous and synonymous substitution rates suggested that FKBP25 undergoes purifying selection throughout the whole vertebrate evolution. Moreover, the result of site-specific tests showed that no sites were detected under positive selection. Only one PPIase domain was detected by searching FKBP25 sequences at Pfam and SMART domain databases. Mammalian FKBP25 possess exon-intron conservation, although conservation in the whole vertebrate lineage is incomplete. The result of this study suggests that the purifying selection triggers FKBP25 evolutionary history, which allows us to discover the complete role of the PPIase domain in the interaction between FKBP25 and nuclear proteins. Moreover, intron alterations during FKBP25 evolution that regulate gene splicing may be involved in the purifying selection.


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