scholarly journals Kaposi’s sarcoma-associated herpesvirus protein ORF75 among HIV-1 patients in Kenya

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Rodgers N. Demba ◽  
Sylviah M. Aradi ◽  
Matilu Mwau ◽  
Walter O. Mwanda

Background: Histology is used to identify Kaposi’s sarcoma (KS) in countries with low resources to fund healthcare costs. Approximately 95% of KS cases can be detected using a polymerase chain reaction.Objective: To determine the presence of the open reading frame 75 (ORF75) gene associated with Kaposi’s sarcoma herpes virus among HIV-1/AIDS patients and to describe morphological presentations of KS.Methods: This was a retrospective, descriptive study of archived tissue blocks collected from 2013 to 2016. Haematoxylin and eosin staining was used to identify KS. Deoxyribonucleic acid from archived tissue blocks was extracted and a nested polymerase chain reaction was used to detect the ORF75 gene.Results: All 81 cases in this study had been diagnosed as HIV-1 positive, of which 68 had hallmark features of KS in the histology report and 13 had features suggestive of KS (‘KS-like’). Microscopic identification of KS by haematoxylin and eosin staining was considered a significant indicator of KS herpes virus ORF75 gene positivity (p = 0.002). The ORF75 gene was detected in 60.5% (49/81) of tissue blocks; 27.2% were men (22/81) and 33.3% were women (27/81). The ORF75 gene was observed to be present in up to 15.4% (2/13) of the cases reported to have KS-like features.Conclusion: Following the initial diagnosis of KS by histology, the ORF75 gene was fur-ther detected from both cases that had hallmark features of KS as well as among cases with KS-like fea-tures.

2021 ◽  
Author(s):  
Konstantin Roeder ◽  
Amy M. Barker ◽  
Adrian Whitehouse ◽  
Samuela Pasquali

Kaposi's sarcoma-associated herpes virus (KSHV) is a human oncovirus. KSHV relies on manipulating the host cell N6- methyl adenosine (m6A) RNA modification pathway. Methylation within a RNA stem loop of the open reading frame 50 (ORF50) enhances transcript stability via the recruitment of the m6A reader, SND1. In this contribution we explore the energy landscapes of the unmethylated and methylated RNA stem loops of ORF50 to investigate the effect of methylation on the structure of the stem loop. We observe a significant shift upon methylation between an open and closed configuration of the top of the stem loop. In the unmethylated stem loop the closed configuration is much lower in energy, and, as a result, exhibits higher occupancy.


2020 ◽  
Vol 23 (04) ◽  
pp. 286-297
Author(s):  
Hind Hamed Shaker ◽  
Luma Amer Yasir ◽  
Ausama Abed-Alkadum Alajeely ◽  
Saad Hasan Mohammed Ali ◽  
Shakir H. Mohammed Al-Alwany

Oral Oncology ◽  
1998 ◽  
Vol 34 (1) ◽  
pp. 5-14 ◽  
Author(s):  
S.R Porter ◽  
L Di Alberti ◽  
N Kumar

2007 ◽  
Vol 11 (5) ◽  
pp. 589-599 ◽  
Author(s):  
Phelps J Lambert ◽  
Aniqa Z Shahrier ◽  
Audy G Whitman ◽  
Ossie F Dyson ◽  
Adrian J Reber ◽  
...  

The Lancet ◽  
1995 ◽  
Vol 346 (8976) ◽  
pp. 712 ◽  
Author(s):  
Mark Howard ◽  
Nicola Brink ◽  
Robert Miller ◽  
Richard Tedder

2010 ◽  
Vol 5 (1) ◽  
pp. 14 ◽  
Author(s):  
Babatyi I Malope-Kgokong ◽  
Patrick MacPhail ◽  
Georgina Mbisa ◽  
Edith Ratshikhopa ◽  
Mhairi Maskew ◽  
...  

2000 ◽  
Vol 165 (4) ◽  
pp. 2077-2083 ◽  
Author(s):  
Christian Brander ◽  
Todd Suscovich ◽  
Yun Lee ◽  
Phuong Thi Nguyen ◽  
Paula O’Connor ◽  
...  

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