The OntoNotes project is creating a corpus of large-scale, accurate, and integrated annotation of multiple levels of the shallow semantic structure in text. Such rich, integrated annotation covering many levels will allow for richer, cross-level models enabling significantly better automatic semantic analysis. At the same time, it demands a robust, efficient, scalable mechanism for storing and accessing these complex inter-dependent annotations. We describe a relational database representation that captures both the inter- and intra-layer dependencies and provide details of an object-oriented API for efficient, multi-tiered access to this data.