duplex destabilization
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scholarly journals Dynamics of the SARS-CoV-2 nucleoprotein N-terminal domain triggers RNA duplex destabilization

2021 ◽  
Author(s):  
Ícaro P. Caruso ◽  
Karoline Sanches ◽  
Andrea T. Da Poian ◽  
Anderson S. Pinheiro ◽  
Fabio C.L. Almeida
Keyword(s):  
Terminal Domain ◽  
Nucleoprotein N ◽  
Duplex Destabilization

scholarly journals Formation of G-quadruplex structure in supercoiled DNA under molecularly crowded conditions

RSC Advances ◽  
2019 ◽  
Vol 9 (45) ◽  
pp. 26248-26251 ◽  
Author(s):  
Dawei Li ◽  
Peiwen Peng ◽  
Zhaoqi Yang ◽  
Bei Lv
Keyword(s):  
Dna Supercoiling ◽  
Molecular Crowding ◽  
Supercoiled Dna ◽  
Circular Dna ◽  
Quadruplex Structure ◽  
G Quadruplex ◽  
Combined Actions ◽  
Duplex Destabilization

It is demonstrated that G-quadruplex generated from G-rich duplex in a circular DNA as a result of quadruplex stabilization and duplex destabilization created by the combined actions of negative DNA supercoiling and molecular crowding condition.

scholarly journals Stress-induced duplex destabilization (SIDD) profiles for T7 bacteriophage promoters

2018 ◽  
Vol 10 (6) ◽  
pp. 867-878
Author(s):  
Mikhail Anatolievich Orlov ◽  
Svetlana Grigor'evnu Kamzolova ◽  
Artem Andreevich Ryasik ◽  
Evgenia Andreevna Zykova ◽  
A. A. Sorokin
Keyword(s):  
Duplex Destabilization ◽  
T7 Bacteriophage

scholarly journals Temperature Dependence of L-Proline RNA Duplex Destabilization

2017 ◽  
Vol 112 (3) ◽  
pp. 68a
Author(s):  
Jeffrey J. Schwinefus ◽  
Kalpit Modi ◽  
Nadia Baka
Keyword(s):  
Temperature Dependence ◽  
Duplex Destabilization

Methylation on CpG repeats modulates hydroxymethylcytosine induced duplex destabilization

RSC Advances ◽  
2016 ◽  
Vol 6 (54) ◽  
pp. 48858-48862 ◽  
Author(s):  
Qiong Wu ◽  
Jiun Ru Wong ◽  
Penny Liu Qing Yeo ◽  
Dawei Zhang ◽  
Fangwei Shao
Keyword(s):  
Duplex Destabilization

The destabilization effect of 5-hydroxymethylcytosine on CpG repeats can be reversed in heavily methylated duplex.

scholarly journals Quantifying the Temperature Dependence of Glycine—Betaine RNA Duplex Destabilization

Biochemistry ◽  
2013 ◽  
Vol 52 (51) ◽  
pp. 9339-9346 ◽  
Author(s):  
Jeffrey J. Schwinefus ◽  
Ryan J. Menssen ◽  
James M. Kohler ◽  
Elliot C. Schmidt ◽  
Alexandra L. Thomas
Keyword(s):  
Temperature Dependence ◽  
Glycine Betaine ◽  
Duplex Destabilization

Nucleobase-caged peptide nucleic acids: PNA/PNA duplex destabilization and light-triggered PNA/PNA recognition

2013 ◽  
Vol 19 (7) ◽  
pp. 415-422 ◽  
Author(s):  
Samit Guha ◽  
Julia Graf ◽  
Björn Göricke ◽  
Ulf Diederichsen
Keyword(s):  
Nucleic Acids ◽  
Peptide Nucleic Acids ◽  
Caged Peptide ◽  
Duplex Destabilization

Duplex Destabilization by Four Ribosomal DEAD-Box Proteins

Biochemistry ◽  
2012 ◽  
Vol 51 (50) ◽  
pp. 10109-10118 ◽  
Author(s):  
Ivelitza Garcia ◽  
Michael J. Albring ◽  
Olke C. Uhlenbeck
Keyword(s):  
Dead Box ◽  
Duplex Destabilization
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