Investigation of binding site density: Effects on the interaction between cibacron blue-dextran conjugates and lysozyme

1990 ◽  
Vol 36 (11) ◽  
pp. 1090-1096 ◽  
Author(s):  
A. G. Mayes ◽  
J. D. Moore ◽  
R. Eisenthal ◽  
J. Hubble
2016 ◽  
Vol 335 ◽  
pp. 58-61 ◽  
Author(s):  
Donghui Jo ◽  
Kyounghwan Lee ◽  
Gi Tae Park ◽  
Suk Bong Hong

1999 ◽  
Vol 46 (2) ◽  
pp. 419-429 ◽  
Author(s):  
M Danieluk ◽  
R Buś ◽  
S Pikuła ◽  
J Bandorowicz-Pikuła

Annexin VI (AnxVI) from porcine liver, a member of the annexin family of Ca(2+)- and membrane-binding proteins, has been shown to bind ATP in vitro with a K(d) in the low micromolar concentration range. However, this protein does not contain within its primary structure any ATP-binding consensus motifs found in other nucleotide-binding proteins. In addition, binding of ATP to AnxVI resulted in modulation of AnxVI function, which was accompanied by changes in AnxVI affinity to Ca2+ in the presence of ATP. Using limited proteolytic digestion, purification of protein fragments by affinity chromatography on ATP-agarose, and direct sequencing, the ATP-binding site of AnxVI was located in a C-terminal half of the AnxVI molecule. To further study AnxVI-nucleotide interaction we have employed a functional nucleotide analog, Cibacron blue 3GA (CB3GA), a triazine dye which is commonly used to purify multiple ATP-binding proteins and has been described to modulate their activities. We have observed that AnxVI binds to CB3GA immobilized on agarose in a Ca(2+)-dependent manner. Binding is reversed by EGTA and by ATP and, to a lower extent, by other adenine nucleotides. CB3GA binds to AnxVI also in solution, evoking reversible aggregation of protein molecules, which resembles self-association of AnxVI molecules either in solution or on a membrane surface. Our observations support earlier findings that AnxVI is an ATP-binding protein.


PLoS ONE ◽  
2015 ◽  
Vol 10 (12) ◽  
pp. e0145225 ◽  
Author(s):  
Katherine Gurdziel ◽  
David S. Lorberbaum ◽  
Aaron M. Udager ◽  
Jane Y. Song ◽  
Neil Richards ◽  
...  

Life Sciences ◽  
1985 ◽  
Vol 36 (2) ◽  
pp. 183-190 ◽  
Author(s):  
Elizabeth I. Tietz ◽  
Fernando Gomez ◽  
Robert F. Berman

1988 ◽  
Vol 251 (1) ◽  
pp. 141-145 ◽  
Author(s):  
A A Horner ◽  
M Kusche ◽  
U Lindahl ◽  
C B Peterson

Rat skin heparin proteoglycans vary markedly in the proportions of their constituent polysaccharide chains that have high binding affinity for antithrombin. As the proportion of such chains in a proteoglycan rises, their degree of affinity for antithrombin also increases [Horner (1987) Biochem. J. 244, 693-698]. The antithrombin-binding-site densities of such chains have now been determined, by measuring heparin-induced enhancement of the intrinsic fluorescence of antithrombin and by chemical analysis for the disaccharide sequence glucuronosyl-N-sulphoglucosaminyl (3,6-di-O-sulphate), which is unique to this site in heparin [Lindahl, Bäckström, Thunberg & Leder (1980) Proc. Natl. Acad. Sci. U.S.A. 77, 6551-6555]. Antithrombin-binding-site density ranged from one to five sites per chain.


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