AbstractWe are nearing the end of a remarkable period that began in the 1960s in which semiconductor manufacturers succeeded in shrinking die and feature sizes logarithmically, thus growing transistor counts exponentially with time. As we reach the theoretical physical limits of classical MOSFET semiconductors, DNA is a highly attractive candidate for future miniaturization of microprocessors. Here we show a foundational electronic device - a transistor - can be constructed from DNA. The nanodevice is comprised of two strands, one of which can be selectively switched between a G-quadruplex and duplex or single-stranded conformations. This switching ability arises from our discovery that perchlorate, a chaotropic Hofmeister ion, selectively destabilizes duplex over G-quadruplex DNA. By varying perchlorate concentration, we show that the device can be operated as a switch or signal amplifier. State switching can be achieved in three ways: thermally, by dilution, or by concentration. In each case, when operated in the presence of the cofactor hemin, the device catalyzes electron transfer in only the G-quadruplex state.
Topology-Selective, Fluorescent “Light-Up” Probes for G-Quadruplex DNA Based on Photoinduced Electron Transfer
