Detection of tyrosine phosphorylated peptides via skimmer collision-induced dissociation/ion trap mass spectrometry

2003 ◽  
Vol 38 (3) ◽  
pp. 257-264 ◽  
Author(s):  
Melissa D. Zolodz ◽  
Karl V. Wood
Keyword(s):  
Mass Spectrometry ◽  
Ion Trap ◽  
Collision Induced Dissociation ◽  
Ion Trap Mass Spectrometry ◽  
Phosphorylated Peptides

scholarly journals Skimmer CID‒ion trap mass spectrometry of phosphotyrosine‒containing peptides

2004 ◽  
Vol 18 (3) ◽  
pp. 441-451
Author(s):  
Melissa D. Zolodz ◽  
Karl V. Wood
Keyword(s):  
Mass Spectrometry ◽  
Ion Trap ◽  
Phosphorylation Site ◽  
Ion Trap Mass Spectrometry ◽  
Cellular Functions ◽  
Factors Affecting ◽  
Parent Protein ◽  
Phosphorylated Peptides ◽  
Phosphorylated Peptide ◽  
Analytical Tools

Proteomic analysis is becoming a popular field in science. Analysis of protein modifications is useful in deciphering cellular functions and errors in pathways that can result in disease. There has been increased interest in the phosphotyrosine proteome. Due to the difficulty in finding the location of the tyrosine phosphorylation site in the tyrosine phosphorylated peptide or even to verify that the parent protein is a phosphotyrosyl‒protein, new analytical tools are being developed. The phosphotyrosine immonium ion can be produced via skimmer CID for detection via ion trap mass spectrometry and is a useful marker for the indication of the presence of a phosphotyrosine residue. Skimmer CID analysis can also be used to differentiate phosphotyrosine‒containing peptides from other phosphorylated peptides. In this study, phosphotyrosine‒containing peptides were analyzed by skimmer CID in an ion trap mass spectrometer. The factors affecting the signal abundance of the phosphotyrosine immonium ion were investigated.

Electrospray ionization mass spectrometry of the cerium(III)-phosphomolybdate complex (NH4)11Ce(PMo11O39)2

2010 ◽  
Vol 1264 ◽  
Author(s):  
Travis Henry Bray ◽  
Roy Copping ◽  
David K. Shuh ◽  
John Gibson
Keyword(s):  
Mass Spectrometry ◽  
Electrospray Ionization ◽  
Gas Phase ◽  
Ion Trap ◽  
Quadrupole Ion Trap ◽  
Collision Induced Dissociation ◽  
Ion Trap Mass Spectrometry ◽  
Ionization Mass ◽  
Naturally Occurring ◽  
Gas Phase Ions

AbstractElectrospray ionization quadrupole ion trap mass spectrometry of the ammonium lanthanide(III) phosphomolybdate complex (NH4)11Ce(III)(PMo11O39)2 has been conducted revealing the Ce-POM complexes H2Ce(III)P2Mo22O753- and Ce(III)PMo11O382- as the primary Ce species in 10 mM solutions. From the complex isotopic fingerprints produced through the assembly of multiple molybdenum atoms, a transition metal with seven naturally occurring isotopes, the identities of larger ions were confirmed via successive collision induced dissociation (CID) studies of the gas phase ions. The result of these CID studies was the production of smaller ions with reduced molybdenum content, allowing for comparison between calculated and experimental isotopic distributions. CID studies also provided insights into favored fragmentation pathways. These studies provide a basis to explore speciation and ESI behavior of actinide cluster complexes.

Fragmentation Pathway of Acevaltrate by Electro-Spray Ionization Ion-Trap Mass Spectrometry

2011 ◽  
Vol 361-363 ◽  
pp. 1745-1747
Author(s):  
Yong Gang Liu ◽  
Yong Liu ◽  
Qun Ma
Keyword(s):  
Mass Spectrometry ◽  
Ion Trap ◽  
Fragmentation Pathway ◽  
The Other ◽  
Collision Induced Dissociation ◽  
Ion Trap Mass Spectrometry ◽  
Electro Spray Ionization ◽  
Branched Chain ◽  
Positive Ion

The fragmentation pathway of acevaltrate was investigated by electro-spray ionization ion-trap mass spectrometry．Under the positive ion mode, pseudo-molecular [M+Na]+ could be easily obtained，and fragmentation pathway presented a certain regularity. One of the major fragmentations observed in the collision induced dissociation(CID) spectrum was loss of branched-chain, and the other was that three-membered oxygen-containing rings would break into aldehyde. These results might be used to forecast the structures of irodoids.

Collision-induced dissociation of glycero phospholipids using electrospray ion-trap mass spectrometry

2001 ◽  
Vol 15 (24) ◽  
pp. 2393-2398 ◽  
Author(s):  
�smund Larsen ◽  
Steinar Uran ◽  
Petter Balke Jacobsen ◽  
Tore Skotland
Keyword(s):  
Mass Spectrometry ◽  
Ion Trap ◽  
Collision Induced Dissociation ◽  
Ion Trap Mass Spectrometry

TRIGLYCERIDE COMPOSITION OF SIXTEEN STRAINS OF MARINE DIATOM

2013 ◽  
Vol 5 (1) ◽  
Author(s):  
Lily M.G. Panggabean ◽  
Abdullah Rasyid ◽  
Zarrah Duniani ◽  
Yana Meliana ◽  
Indah Kurniasih
Keyword(s):  
Mass Spectrometry ◽  
Fatty Acid ◽  
Double Bond ◽  
Unsaturated Fatty Acid ◽  
Ion Trap ◽  
Carbon Chain ◽  
Highly Unsaturated Fatty Acid ◽  
Marine Diatom ◽  
Ion Trap Mass Spectrometry ◽  
Spectra Analysis

Trigliceride or triacylglicerol (TAG) composition in crude oil of sixteen strain of marine diatom has been detected by spectra analyses on an Electrospray - Ion Trap – Mass Spectrometry (ESI-IT-MS) HCT Bruker-Daltonic GmbH instrument with AgNO3 used as coordination ionization agent. Biomass samples of each microalga strain were taken from early and late stationary cultures in f/2 enriched seawater and algal oils were extracted according to Bligh and Dyer. Results from spectra analysis showed that P-Pt-P (C16:0-C16:1-C16:0) were distinguished in TAG from diatom strains Chaetoceros sp.1, Chaetoceros sp.2, Thalasiossira sp.1, Thalasiossira sp.2, Thalasiossira sp.3, Navicula sp. 1, Navicula sp. 2, Navicula sp. 3, Navicula sp. 4, Nitzschia sp. 2 and Amphora sp. In contrast, TAGs in Melosira sp. included P-P-P (C16:0-C16:0-C16:0) and P-P-O (C16:0-C16:0-C18:1) were identified. TAGs from Chaetoceros sp. were the most varies among samples, i.e. P-Pt-P (C16:0-C16:1-C16:0), A-P-M (C20:4-C16:0-C14:0), P-Pt-Lt (C16:0-C16:1-C18:3), P-Pt-A (C16:0-C16:1-C20:4), D-P-P (C22:6-C16:0-C16:0), A-Ln-P (C20:4-C18:2-C16:0). Various TAGs were also detected in Nitzschia sp.2, i.e. P-Pt-M (C16:0-C16:1-C14:0), P-Pt-P (C16:0-C16:1-C16:0), P-Pt-S (C16:0-C16:1-C18:0), P-Pt-A (C16:0-C16:1-C20:4). TAGs composition in Skeletonema strains that similar to those in Nitzschia sp.1 has longer carbon, i.e. P-P-O (C16:0-C16:0-C18:1), P-O-O (C16:0-C18:1-C18:1) and O-O-O (C18:1-C18:1-C18:1). TAGs with longer carbon chain and more double bond including highly unsaturated fatty acid C20:4 were increased with culture age in diatoms Chaetoceros sp.1, Chaetoceros sp.2, Thalasiossira sp.2, Navicula sp.1 and Nitzschia sp. 2.Keywords: diatom, TAG, ESI-IT-MS, f/2, early and late stationary

Electron spray ion trap mass spectrometry of isoflavones and isoflavone aglycones of Semen Sojae Praeparatum

2013 ◽  
Vol 33 (10) ◽  
pp. 1108-1115
Author(s):  
Gao FANG ◽  
Peng ZHANG ◽  
Xiao-lan YE ◽  
Xia ZHU ◽  
Xin ZHAO ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Ion Trap ◽  
Ion Trap Mass Spectrometry
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