SCLpred‐MEM : subcellular localization prediction of membrane proteins by Deep N‐to‐1 Convolutional Neural Networks

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.26144 ◽

2021 ◽

Author(s):

Manaz Kaleel ◽

Liam Ellinger ◽

Clodagh Lalor ◽

Gianluca Pollastri ◽

Catherine Mooney

Keyword(s):

Neural Networks ◽

Membrane Proteins ◽

Subcellular Localization ◽

Convolutional Neural Networks ◽

Subcellular Localization Prediction ◽

Localization Prediction

De Novo Protein Subcellular Localization Prediction by N-to-1 Neural Networks

Computational Intelligence Methods for Bioinformatics and Biostatistics - Lecture Notes in Computer Science ◽

10.1007/978-3-642-21946-7_3 ◽

2011 ◽

pp. 31-43 ◽

Cited By ~ 1

Author(s):

Catherine Mooney ◽

Yong-Hong Wang ◽

Gianluca Pollastri

Keyword(s):

Neural Networks ◽

Subcellular Localization ◽

De Novo ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

Subcellular localization prediction for human internal and organelle membrane proteins with projected gene ontology scores

Journal of Theoretical Biology ◽

10.1016/j.jtbi.2012.08.016 ◽

2012 ◽

Vol 313 ◽

pp. 61-67 ◽

Cited By ~ 18

Author(s):

Pufeng Du ◽

Yang Tian ◽

Yan Yan

Keyword(s):

Gene Ontology ◽

Membrane Proteins ◽

Subcellular Localization ◽

Subcellular Localization Prediction ◽

Organelle Membrane ◽

Localization Prediction

SCLpred: protein subcellular localization prediction by N-to-1 neural networks

Bioinformatics ◽

10.1093/bioinformatics/btr494 ◽

2011 ◽

Vol 27 (20) ◽

pp. 2812-2819 ◽

Cited By ~ 36

Author(s):

C. Mooney ◽

Y.-H. Wang ◽

G. Pollastri

Keyword(s):

Neural Networks ◽

Subcellular Localization ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

Review of Protein Subcellular Localization Prediction

Current Bioinformatics ◽

10.2174/1574893609666140212000304 ◽

2014 ◽

Vol 9 (3) ◽

pp. 331-342 ◽

Cited By ~ 21

Author(s):

Zhen Wang ◽

Quan Zou ◽

Yi Jiang ◽

Ying Ju ◽

Xiangxiang Zeng

Keyword(s):

Subcellular Localization ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

Support vector machine approach for protein subcellular localization prediction

Bioinformatics ◽

10.1093/bioinformatics/17.8.721 ◽

2001 ◽

Vol 17 (8) ◽

pp. 721-728 ◽

Cited By ~ 553

Author(s):

S. Hua ◽

Z. Sun

Keyword(s):

Support Vector Machine ◽

Subcellular Localization ◽

Support Vector ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

Extreme Learning Machine based bacterial protein subcellular localization prediction

2008 IEEE International Joint Conference on Neural Networks (IEEE World Congress on Computational Intelligence) ◽

10.1109/ijcnn.2008.4634051 ◽

2008 ◽

Cited By ~ 2

Author(s):

Yuan Lan ◽

Yeng Chai Soh ◽

Guang-Bin Huang

Keyword(s):

Subcellular Localization ◽

Extreme Learning Machine ◽

Bacterial Protein ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Learning Machine ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

New Feature Vector for Apoptosis Protein Subcellular Localization Prediction

Advances in Computing and Communications - Communications in Computer and Information Science ◽

10.1007/978-3-642-22709-7_30 ◽

2011 ◽

pp. 294-301 ◽

Cited By ~ 4

Author(s):

Geetha Govindan ◽

Achuthsankar S. Nair

Keyword(s):

Subcellular Localization ◽

Feature Vector ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Apoptosis Protein ◽

New Feature ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

PROTEIN SUBCELLULAR LOCALIZATION PREDICTION

The Practical Bioinformatician ◽

10.1142/9789812562340_0009 ◽

2004 ◽

pp. 193-216 ◽

Cited By ~ 1

Author(s):

Paul Horton ◽

Yuri Mukai ◽

Kenta Nakai

Keyword(s):

Subcellular Localization ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

Tissue-Specific Subcellular Localization Prediction Using Multi-Label Markov Random Fields

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2019.2897683 ◽

2019 ◽

Vol 16 (5) ◽

pp. 1471-1482

Author(s):

Lu Zhu ◽

Ralf Hofestadt ◽

Martin Ester

Keyword(s):

Subcellular Localization ◽

Random Fields ◽

Markov Random Fields ◽

Tissue Specific ◽

Subcellular Localization Prediction ◽

Markov Random ◽

Localization Prediction

Network based subcellular localization prediction for multi-label proteins

2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops (BIBMW) ◽

10.1109/bibmw.2011.6112416 ◽

2011 ◽

Cited By ~ 5

Author(s):

Ananda Mohan Mondal ◽

Jhih-rong Lin ◽

Jianjun Hu ◽

Ananda Mohan Mondal

Keyword(s):

Subcellular Localization ◽

Subcellular Localization Prediction ◽

Localization Prediction