Subcellular localization prediction for human internal and organelle membrane proteins with projected gene ontology scores

Journal of Theoretical Biology ◽

10.1016/j.jtbi.2012.08.016 ◽

2012 ◽

Vol 313 ◽

pp. 61-67 ◽

Author(s):

Pufeng Du ◽

Yang Tian ◽

Yan Yan

Keyword(s):

Gene Ontology ◽

Membrane Proteins ◽

Subcellular Localization ◽

Subcellular Localization Prediction ◽

Organelle Membrane ◽

Localization Prediction

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SCLpred‐MEM : subcellular localization prediction of membrane proteins by Deep N‐to‐1 Convolutional Neural Networks

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.26144 ◽

2021 ◽

Author(s):

Manaz Kaleel ◽

Liam Ellinger ◽

Clodagh Lalor ◽

Gianluca Pollastri ◽

Catherine Mooney

Keyword(s):

Neural Networks ◽

Membrane Proteins ◽

Subcellular Localization ◽

Convolutional Neural Networks ◽

Subcellular Localization Prediction ◽

Localization Prediction

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Protein subcellular localization prediction based on profile alignment and Gene Ontology

2011 IEEE International Workshop on Machine Learning for Signal Processing ◽

10.1109/mlsp.2011.6064613 ◽

2011 ◽

Author(s):

Shibiao Wan ◽

Man-Wai Mak ◽

Sun-Yuan Kung

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction ◽

Profile Alignment

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GOASVM: Protein subcellular localization prediction based on Gene ontology annotation and SVM

2012 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP) ◽

10.1109/icassp.2012.6288356 ◽

2012 ◽

Author(s):

Shibiao Wan ◽

Man-Wai Mak ◽

Sun-Yuan Kung

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Gene Ontology Annotation ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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Improving subcellular localization prediction using text classification and the gene ontology

Bioinformatics ◽

10.1093/bioinformatics/btn463 ◽

2008 ◽

Vol 24 (21) ◽

pp. 2512-2517 ◽

Author(s):

A. Fyshe ◽

Y. Liu ◽

D. Szafron ◽

R. Greiner ◽

P. Lu

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Text Classification ◽

Subcellular Localization Prediction ◽

Localization Prediction

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CELLO2GO: A Web Server for Protein subCELlular LOcalization Prediction with Functional Gene Ontology Annotation

PLoS ONE ◽

10.1371/journal.pone.0099368 ◽

2014 ◽

Vol 9 (6) ◽

pp. e99368 ◽

Author(s):

Chin-Sheng Yu ◽

Chih-Wen Cheng ◽

Wen-Chi Su ◽

Kuei-Chung Chang ◽

Shao-Wei Huang ◽

...

Keyword(s):

Gene Ontology ◽

Subcellular Localization ◽

Gene Ontology Annotation ◽

Functional Gene ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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Review of Protein Subcellular Localization Prediction

Current Bioinformatics ◽

10.2174/1574893609666140212000304 ◽

2014 ◽

Vol 9 (3) ◽

pp. 331-342 ◽

Author(s):

Zhen Wang ◽

Quan Zou ◽

Yi Jiang ◽

Ying Ju ◽

Xiangxiang Zeng

Keyword(s):

Subcellular Localization ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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Support vector machine approach for protein subcellular localization prediction

Bioinformatics ◽

10.1093/bioinformatics/17.8.721 ◽

2001 ◽

Vol 17 (8) ◽

pp. 721-728 ◽

Author(s):

S. Hua ◽

Z. Sun

Keyword(s):

Support Vector Machine ◽

Subcellular Localization ◽

Support Vector ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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Extreme Learning Machine based bacterial protein subcellular localization prediction

2008 IEEE International Joint Conference on Neural Networks (IEEE World Congress on Computational Intelligence) ◽

10.1109/ijcnn.2008.4634051 ◽

2008 ◽

Author(s):

Yuan Lan ◽

Yeng Chai Soh ◽

Guang-Bin Huang

Keyword(s):

Subcellular Localization ◽

Extreme Learning Machine ◽

Bacterial Protein ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Learning Machine ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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New Feature Vector for Apoptosis Protein Subcellular Localization Prediction

Advances in Computing and Communications - Communications in Computer and Information Science ◽

10.1007/978-3-642-22709-7_30 ◽

2011 ◽

pp. 294-301 ◽

Author(s):

Geetha Govindan ◽

Achuthsankar S. Nair

Keyword(s):

Subcellular Localization ◽

Feature Vector ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Apoptosis Protein ◽

New Feature ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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PROTEIN SUBCELLULAR LOCALIZATION PREDICTION

The Practical Bioinformatician ◽

10.1142/9789812562340_0009 ◽

2004 ◽

pp. 193-216 ◽

Author(s):

Paul Horton ◽

Yuri Mukai ◽

Kenta Nakai

Keyword(s):

Subcellular Localization ◽

Protein Subcellular Localization ◽

Subcellular Localization Prediction ◽

Protein Subcellular Localization Prediction ◽

Localization Prediction

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