A Feature Generation Algorithm for Sequences with Application to Splice-Site Prediction

Lecture Notes in Computer Science - Knowledge Discovery in Databases: PKDD 2006 ◽

10.1007/11871637_55 ◽

2006 ◽

pp. 553-560 ◽

Author(s):

Rezarta Islamaj ◽

Lise Getoor ◽

W. John Wilbur

Keyword(s):

Splice Site ◽

Feature Generation ◽

Generation Algorithm ◽

Splice Site Prediction ◽

Site Prediction

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An Evolutionary Algorithm Approach for Feature Generation from Sequence Data and Its Application to DNA Splice Site Prediction

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2012.53 ◽

2012 ◽

Vol 9 (5) ◽

pp. 1387-1398 ◽

Author(s):

Uday Kamath ◽

Jack Compton ◽

Rezarta Islamaj-Dogan ◽

Kenneth A. De Jong ◽

Amarda Shehu

Keyword(s):

Evolutionary Algorithm ◽

Splice Site ◽

Sequence Data ◽

Feature Generation ◽

Splice Site Prediction ◽

Site Prediction

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PRE-mRNA SECONDARY STRUCTURE PREDICTION AIDS SPLICE SITE PREDICTION

Biocomputing 2002 ◽

10.1142/9789812799623_0021 ◽

2001 ◽

Author(s):

DONALD J. PATTERSON ◽

KEN YASUHARA ◽

WALTER L. RUZZO

Keyword(s):

Secondary Structure ◽

Splice Site ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Mrna Secondary Structure ◽

Splice Site Prediction ◽

Site Prediction

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An empirical study of self-training and data balancing techniques for splice site prediction

International Journal of Bioinformatics Research and Applications ◽

10.1504/ijbra.2017.082055 ◽

2017 ◽

Vol 13 (1) ◽

pp. 40

Author(s):

Ana Stanescu ◽

Doina Caragea

Keyword(s):

Empirical Study ◽

Splice Site ◽

Splice Site Prediction ◽

Site Prediction

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A New Classification Method for Human Gene Splice Site Prediction

Health Information Science - Lecture Notes in Computer Science ◽

10.1007/978-3-642-29361-0_16 ◽

2012 ◽

pp. 121-130 ◽

Author(s):

Dan Wei ◽

Weiwei Zhuang ◽

Qingshan Jiang ◽

Yanjie Wei

Keyword(s):

Splice Site ◽

Classification Method ◽

New Classification ◽

Splice Site Prediction ◽

Site Prediction

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Analysis of Effect of the Position on Weighted Degree Kernel for Splice Site Prediction

Proceedings of the 2016 International Conference on Biological Sciences and Technology ◽

10.2991/bst-16.2016.27 ◽

2016 ◽

Author(s):

Tian-Qi Wang ◽

Yong Xu

Keyword(s):

Splice Site ◽

Weighted Degree ◽

Splice Site Prediction ◽

Site Prediction

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Random Forest in Splice Site Prediction of Human Genome

XIV Mediterranean Conference on Medical and Biological Engineering and Computing 2016 - IFMBE Proceedings ◽

10.1007/978-3-319-32703-7_100 ◽

2016 ◽

pp. 518-523 ◽

Author(s):

Elham Pashaei ◽

Mustafa Ozen ◽

Nizamettin Aydin

Keyword(s):

Random Forest ◽

Human Genome ◽

Splice Site ◽

Splice Site Prediction ◽

Site Prediction

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Accurate splice site prediction using support vector machines

BMC Bioinformatics ◽

10.1186/1471-2105-8-s10-s7 ◽

2007 ◽

Vol 8 (Suppl 10) ◽

pp. S7 ◽

Author(s):

Sören Sonnenburg ◽

Gabriele Schweikert ◽

Petra Philips ◽

Jonas Behr ◽

Gunnar Rätsch

Keyword(s):

Support Vector Machines ◽

Splice Site ◽

Support Vector ◽

Splice Site Prediction ◽

Site Prediction ◽

Vector Machines

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Digging into Acceptor Splice Site Prediction: An Iterative Feature Selection Approach

Lecture Notes in Computer Science - Knowledge Discovery in Databases: PKDD 2004 ◽

10.1007/978-3-540-30116-5_36 ◽

2004 ◽

pp. 386-397 ◽

Author(s):

Yvan Saeys ◽

Sven Degroeve ◽

Yves Van de Peer

Keyword(s):

Feature Selection ◽

Splice Site ◽

Acceptor Splice Site ◽

Splice Site Prediction ◽

Site Prediction ◽

Selection Approach ◽

Feature Selection Approach

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Splice Site Prediction Using Artificial Neural Networks

Computational Intelligence Methods for Bioinformatics and Biostatistics - Lecture Notes in Computer Science ◽

10.1007/978-3-642-02504-4_9 ◽

2009 ◽

pp. 102-113 ◽

Author(s):

∅ystein Johansen ◽

Tom Ryen ◽

Trygve Eftes∅l ◽

Thomas Kjosmoen ◽

Peter Ruoff

Keyword(s):

Neural Networks ◽

Artificial Neural Networks ◽

Splice Site ◽

Splice Site Prediction ◽

Site Prediction ◽

Artificial Neural

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A hybrid method for splice site prediction based on Markov model and codon information

International Journal of Data Mining and Bioinformatics ◽

10.1504/ijdmb.2016.10003179 ◽

2016 ◽

Vol 16 (4) ◽

pp. 345

Author(s):

Jinglong Fang ◽

Yanjie Wei ◽

Qingshan Jiang ◽

Yin Peng ◽

Dan Wei

Keyword(s):

Markov Model ◽

Splice Site ◽

Hybrid Method ◽

Splice Site Prediction ◽

Site Prediction

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