Shortest Path Algorithms for a Fixed Start Time

2012 ◽  
pp. 25-43 ◽  
Author(s):  
Betsy George ◽  
Sangho Kim
Keyword(s):  
Shortest Path ◽  
Start Time ◽  
Shortest Path Algorithms

scholarly journals RCy3: Network biology using Cytoscape from within R

F1000Research ◽  
2019 ◽  
Vol 8 ◽  
pp. 1774 ◽  
Author(s):  
Julia A. Gustavsen ◽  
Shraddha Pai ◽  
Ruth Isserlin ◽  
Barry Demchak ◽  
Alexander R. Pico
Keyword(s):  
Shortest Path ◽  
Future Development ◽  
Enrichment Analysis ◽  
Network Biology ◽  
R Package ◽  
Programming Environment ◽  
R Packages ◽  
R Programming ◽  
Shortest Path Algorithms ◽  
Rest Api

RCy3 is an R package in Bioconductor that communicates with Cytoscape via its REST API, providing access to the full feature set of Cytoscape from within the R programming environment. RCy3 has been redesigned to streamline its usage and future development as part of a broader Cytoscape Automation effort. Over 100 new functions have been added, including dozens of helper functions specifically for intuitive data overlay operations. Over 40 Cytoscape apps have implemented automation support so far, making hundreds of additional operations accessible via RCy3. Two-way conversion with networks from \textit{igraph} and \textit{graph} ensures interoperability with existing network biology workflows and dozens of other Bioconductor packages. These capabilities are demonstrated in a series of use cases involving public databases, enrichment analysis pipelines, shortest path algorithms and more. With RCy3, bioinformaticians will be able to quickly deliver reproducible network biology workflows as integrations of Cytoscape functions, complex custom analyses and other R packages.

A Spatio-Temporally Opportunistic Approach to Best-Start-Time Lagrangian Shortest Path

2015 ◽  
pp. 274-291 ◽  
Author(s):  
Sarnath Ramnath ◽  
Zhe Jiang ◽  
Hsuan-Heng Wu ◽  
Venkata M. V. Gunturi ◽  
Shashi Shekhar
Keyword(s):  
Shortest Path ◽  
Start Time

scholarly journals Scalable Single Source Shortest Path Algorithms for Massively Parallel Systems

2017 ◽  
Vol 28 (7) ◽  
pp. 2031-2045 ◽  
Author(s):  
Venkatesan T. Chakaravarthy ◽  
Fabio Checconi ◽  
Prakash Murali ◽  
Fabrizio Petrini ◽  
Yogish Sabharwal
Keyword(s):  
Shortest Path ◽  
Parallel Systems ◽  
Massively Parallel ◽  
Single Source ◽  
Massively Parallel Systems ◽  
Shortest Path Algorithms

scholarly journals Dynamic Shortest Path Algorithms for Hypergraphs

2015 ◽  
Vol 23 (6) ◽  
pp. 1805-1817 ◽  
Author(s):  
Jianhang Gao ◽  
Qing Zhao ◽  
Wei Ren ◽  
Ananthram Swami ◽  
Ram Ramanathan ◽  
...  
Keyword(s):  
Shortest Path ◽  
Shortest Path Algorithms

scholarly journals Inverse shortest path algorithms in protected UMTS access networks

2005 ◽  
Vol 28 (7) ◽  
pp. 765-772 ◽  
Author(s):  
István Gódor ◽  
János Harmatos ◽  
Alpár Jüttner
Keyword(s):  
Shortest Path ◽  
Access Networks ◽  
Shortest Path Algorithms
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