Simultaneous Reconstruction of 4-D Myocardial Motion from Both Tagged and Untagged MR Images Using Nonrigid Image Registration

Author(s):  
Wenzhe Shi ◽  
Maria Murgasova ◽  
Philip Edwards ◽  
Daniel Rueckert
2019 ◽  
Vol 33 (3) ◽  
pp. 401-410
Author(s):  
Katri Nousiainen ◽  
Teemu Mäkelä

Abstract Objective We aimed to develop a vendor-neutral and interaction-free quality assurance protocol for measuring geometric accuracy of head and brain magnetic resonance (MR) images. We investigated the usability of nonrigid image registration in the analysis and looked for the optimal registration parameters. Materials and methods We constructed a 3D-printed phantom and imaged it with 12 MR scanners using clinical sequences. We registered a geometric-ground-truth computed tomography (CT) acquisition to the MR images using an open-source nonrigid-registration-toolbox with varying parameters. We applied the transforms to a set of control points in the CT image and compared their locations to the corresponding visually verified reference points in the MR images. Results With optimized registration parameters, the mean difference (and standard deviation) of control point locations when compared to the reference method was (0.17 ± 0.02) mm for the 12 studied scanners. The maximum displacements varied from 0.50 to 1.35 mm or 0.89 to 2.30 mm, with vendors’ distortion correction on or off, respectively. Discussion Using nonrigid CT–MR registration can provide a robust and relatively test-object-agnostic method for estimating the intra- and inter-scanner variations of the geometric distortions.


2003 ◽  
Vol 22 (2) ◽  
pp. 238-247 ◽  
Author(s):  
J.A. Schnabel ◽  
C. Tanner ◽  
A.D. Castellano-Smith ◽  
A. Degenhard ◽  
M.O. Leach ◽  
...  

Neurosurgery ◽  
2015 ◽  
Vol 76 (6) ◽  
pp. 756-765 ◽  
Author(s):  
Srivatsan Pallavaram ◽  
Pierre-François D'Haese ◽  
Wendell Lake ◽  
Peter E. Konrad ◽  
Benoit M. Dawant ◽  
...  

Abstract BACKGROUND: Finding the optimal location for the implantation of the electrode in deep brain stimulation (DBS) surgery is crucial for maximizing the therapeutic benefit to the patient. Such targeting is challenging for several reasons, including anatomic variability between patients as well as the lack of consensus about the location of the optimal target. OBJECTIVE: To compare the performance of popular manual targeting methods against a fully automatic nonrigid image registration-based approach. METHODS: In 71 Parkinson disease subthalamic nucleus (STN)-DBS implantations, an experienced functional neurosurgeon selected the target manually using 3 different approaches: indirect targeting using standard stereotactic coordinates, direct targeting based on the patient magnetic resonance imaging, and indirect targeting relative to the red nucleus. Targets were also automatically predicted by using a leave-one-out approach to populate the CranialVault atlas with the use of nonrigid image registration. The different targeting methods were compared against the location of the final active contact, determined through iterative clinical programming in each individual patient. RESULTS: Targeting by using standard stereotactic coordinates corresponding to the center of the motor territory of the STN had the largest targeting error (3.69 mm), followed by direct targeting (3.44 mm), average stereotactic coordinates of active contacts from this study (3.02 mm), red nucleus-based targeting (2.75 mm), and nonrigid image registration-based automatic predictions using the CranialVault atlas (2.70 mm). The CranialVault atlas method had statistically smaller variance than all manual approaches. CONCLUSION: Fully automatic targeting based on nonrigid image registration with the use of the CranialVault atlas is as accurate and more precise than popular manual methods for STN-DBS.


2013 ◽  
Vol 22 (12) ◽  
pp. 4905-4917 ◽  
Author(s):  
Wei Sun ◽  
Wiro J. Niessen ◽  
Marijn van Stralen ◽  
Stefan Klein

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