Disease Gene Prioritization Based on Topological Similarity in Protein-Protein Interaction Networks

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-642-20036-6_7 ◽

2011 ◽

pp. 54-68 ◽

Author(s):

Sinan Erten ◽

Gurkan Bebek ◽

Mehmet Koyutürk

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Topological Similarity ◽

Protein Protein Interaction ◽

Disease Gene Prioritization ◽

Protein Protein Interaction Networks

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Network-based disease gene prioritization based on Protein–Protein Interaction Networks

Network Modeling Analysis in Health Informatics and Bioinformatics ◽

10.1007/s13721-020-00260-9 ◽

2020 ◽

Vol 9 (1) ◽

Author(s):

Palak Kaushal ◽

Shailendra Singh

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Disease Gene Prioritization ◽

Protein Protein Interaction Networks

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Exploiting Protein-Protein Interaction Networks for Genome-Wide Disease-Gene Prioritization

PLoS ONE ◽

10.1371/journal.pone.0043557 ◽

2012 ◽

Vol 7 (9) ◽

pp. e43557 ◽

Author(s):

Emre Guney ◽

Baldo Oliva

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Genome Wide ◽

Disease Gene Prioritization ◽

Protein Protein Interaction Networks

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Human Disease-Gene Classification with Integrative Sequence-Based and Topological Features of Protein-Protein Interaction Networks

2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007) ◽

10.1109/bibm.2007.47 ◽

2007 ◽

Author(s):

Aaron Smalter ◽

Seak Fei Lei ◽

Xue-wen Chen

Keyword(s):

Protein Interaction ◽

Human Disease ◽

Disease Gene ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Human Disease Gene ◽

Protein Protein Interaction ◽

Topological Features ◽

Protein Protein Interaction Networks

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A novel link prediction algorithm for reconstructing protein–protein interaction networks by topological similarity

Bioinformatics ◽

10.1093/bioinformatics/bts688 ◽

2012 ◽

Vol 29 (3) ◽

pp. 355-364 ◽

Author(s):

Chengwei Lei ◽

Jianhua Ruan

Keyword(s):

Protein Interaction ◽

Link Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Prediction Algorithm ◽

Topological Similarity ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Investigating the impact human protein–protein interaction networks have on disease-gene analysis

International Journal of Machine Learning and Cybernetics ◽

10.1007/s13042-016-0503-5 ◽

2016 ◽

Vol 9 (3) ◽

pp. 455-464 ◽

Author(s):

Fiona Browne ◽

Haiying Wang ◽

Huiru Zheng

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Gene Analysis ◽

Human Protein ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks ◽

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Faculty Opinions recommendation of Modular decomposition of protein-protein interaction networks.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1020428.232579 ◽

2004 ◽

Author(s):

Ruedi Aebersold

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Modular Decomposition ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Faculty Opinions recommendation of Integrating protein-protein interaction networks with phenotypes reveals signs of interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.718178553.793487291 ◽

2013 ◽

Author(s):

Marc Therrien ◽

Dariel Ashton-Beaucage

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Inferring Protein-Protein Interaction Networks From Mass Spectrometry-Based Proteomic Approaches: A Mini-Review

Computational and Structural Biotechnology Journal ◽

10.1016/j.csbj.2019.05.007 ◽

2019 ◽

Vol 17 ◽

pp. 805-811 ◽

Author(s):

Kumar Yugandhar ◽

Shagun Gupta ◽

Haiyuan Yu

Keyword(s):

Mass Spectrometry ◽

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Better Link Prediction for Protein-Protein Interaction Networks

2020 IEEE 20th International Conference on Bioinformatics and Bioengineering (BIBE) ◽

10.1109/bibe50027.2020.00017 ◽

2020 ◽

Author(s):

Ho Yin Yuen ◽

Jesper Jansson

Keyword(s):

Protein Interaction ◽

Link Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Is the intrinsic disorder of proteins the cause of the scale-free architecture of protein–protein interaction networks?

10.1002/pmic.200600455 ◽

2007 ◽

Vol 7 (6) ◽

pp. 961-964 ◽

Author(s):

Santiago Schnell ◽

Santo Fortunato ◽

Sourav Roy

Keyword(s):

Protein Interaction ◽

Intrinsic Disorder ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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