Human Disease-Gene Classification with Integrative Sequence-Based and Topological Features of Protein-Protein Interaction Networks

Interaction Networks ◽

Human Disease Gene ◽

Topological Features ◽

CHAPTER 2. Protein–Protein Interaction Networks in Human Disease

Protein–Protein Interaction Regulators - Drug Discovery ◽

10.1039/9781788016544-00025 ◽

2020 ◽

pp. 25-48

Author(s):

Brandon S. Dunn ◽

Sharad Awasthi ◽

S. Stephen Yi ◽

Nidhi Sahni

Keyword(s):

Protein Interaction ◽

Human Disease ◽

Interaction Networks ◽

Network-based disease gene prioritization based on Protein–Protein Interaction Networks

Network Modeling Analysis in Health Informatics and Bioinformatics ◽

10.1007/s13721-020-00260-9 ◽

2020 ◽

Vol 9 (1) ◽

Author(s):

Palak Kaushal ◽

Shailendra Singh

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Interaction Networks ◽

Disease Gene Prioritization ◽

Resilience of protein–protein interaction networks as determined by their large-scale topological features

Molecular BioSystems ◽

10.1039/c0mb00256a ◽

2011 ◽

Vol 7 (4) ◽

pp. 1263 ◽

Cited By ~ 10

Author(s):

Francisco A. Rodrigues ◽

Luciano da Fontoura Costa ◽

André Luiz Barbieri

Keyword(s):

Protein Interaction ◽

Large Scale ◽

Interaction Networks ◽

Topological Features ◽

Disease Gene Prioritization Based on Topological Similarity in Protein-Protein Interaction Networks

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-642-20036-6_7 ◽

2011 ◽

pp. 54-68 ◽

Cited By ~ 2

Author(s):

Sinan Erten ◽

Gurkan Bebek ◽

Mehmet Koyutürk

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Interaction Networks ◽

Topological Similarity ◽

Disease Gene Prioritization ◽

Exploiting Protein-Protein Interaction Networks for Genome-Wide Disease-Gene Prioritization

PLoS ONE ◽

10.1371/journal.pone.0043557 ◽

2012 ◽

Vol 7 (9) ◽

pp. e43557 ◽

Cited By ~ 65

Author(s):

Emre Guney ◽

Baldo Oliva

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Interaction Networks ◽

Genome Wide ◽

Disease Gene Prioritization ◽

Investigating the impact human protein–protein interaction networks have on disease-gene analysis

International Journal of Machine Learning and Cybernetics ◽

10.1007/s13042-016-0503-5 ◽

2016 ◽

Vol 9 (3) ◽

pp. 455-464 ◽

Cited By ~ 3

Author(s):

Fiona Browne ◽

Haiying Wang ◽

Huiru Zheng

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Interaction Networks ◽

Gene Analysis ◽

Human Protein ◽

Protein Protein Interaction Networks ◽

The Impact

Faculty Opinions recommendation of Modular decomposition of protein-protein interaction networks.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1020428.232579 ◽

2004 ◽

Author(s):

Ruedi Aebersold

Keyword(s):

Protein Interaction ◽

Interaction Networks ◽

Modular Decomposition ◽

Faculty Opinions recommendation of Integrating protein-protein interaction networks with phenotypes reveals signs of interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.718178553.793487291 ◽

2013 ◽

Author(s):

Marc Therrien ◽

Dariel Ashton-Beaucage

Keyword(s):

Protein Interaction ◽

Interaction Networks ◽

Inferring Protein-Protein Interaction Networks From Mass Spectrometry-Based Proteomic Approaches: A Mini-Review

Computational and Structural Biotechnology Journal ◽

10.1016/j.csbj.2019.05.007 ◽

2019 ◽

Vol 17 ◽

pp. 805-811 ◽

Cited By ~ 7

Author(s):

Kumar Yugandhar ◽

Shagun Gupta ◽

Haiyuan Yu

Keyword(s):

Mass Spectrometry ◽

Protein Interaction ◽

Interaction Networks ◽

2020 IEEE 20th International Conference on Bioinformatics and Bioengineering (BIBE) ◽

Better Link Prediction for Protein-Protein Interaction Networks

10.1109/bibe50027.2020.00017 ◽

2020 ◽

Author(s):

Ho Yin Yuen ◽

Jesper Jansson

Keyword(s):

Protein Interaction ◽

Link Prediction ◽

Interaction Networks ◽