Protein Interaction and Disease Gene Prioritization

Health Informatics: A Computational Perspective in Healthcare - Studies in Computational Intelligence ◽

10.1007/978-981-15-9735-0_14 ◽

2021 ◽

pp. 259-294

Author(s):

Brijendra Gupta

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Disease Gene Prioritization

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Network-based disease gene prioritization based on Protein–Protein Interaction Networks

Network Modeling Analysis in Health Informatics and Bioinformatics ◽

10.1007/s13721-020-00260-9 ◽

2020 ◽

Vol 9 (1) ◽

Author(s):

Palak Kaushal ◽

Shailendra Singh

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Disease Gene Prioritization ◽

Protein Protein Interaction Networks

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Disease Gene Prioritization Based on Topological Similarity in Protein-Protein Interaction Networks

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-642-20036-6_7 ◽

2011 ◽

pp. 54-68 ◽

Author(s):

Sinan Erten ◽

Gurkan Bebek ◽

Mehmet Koyutürk

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Topological Similarity ◽

Protein Protein Interaction ◽

Disease Gene Prioritization ◽

Protein Protein Interaction Networks

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Exploiting Protein-Protein Interaction Networks for Genome-Wide Disease-Gene Prioritization

PLoS ONE ◽

10.1371/journal.pone.0043557 ◽

2012 ◽

Vol 7 (9) ◽

pp. e43557 ◽

Author(s):

Emre Guney ◽

Baldo Oliva

Keyword(s):

Protein Interaction ◽

Disease Gene ◽

Gene Prioritization ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Genome Wide ◽

Disease Gene Prioritization ◽

Protein Protein Interaction Networks

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Semantic Disease Gene Embeddings (SmuDGE): phenotype-based disease gene prioritization without phenotypes

Bioinformatics ◽

10.1093/bioinformatics/bty559 ◽

2018 ◽

Vol 34 (17) ◽

pp. i901-i907 ◽

Author(s):

Mona Alshahrani ◽

Robert Hoehndorf

Keyword(s):

Disease Gene ◽

Gene Prioritization ◽

Disease Gene Prioritization

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PRIORI-T: A tool for rare disease gene prioritization using MEDLINE

PLoS ONE ◽

10.1371/journal.pone.0231728 ◽

2020 ◽

Vol 15 (4) ◽

pp. e0231728 ◽

Author(s):

Aditya Rao ◽

Thomas Joseph ◽

Vangala G. Saipradeep ◽

Sujatha Kotte ◽

Naveen Sivadasan ◽

...

Keyword(s):

Rare Disease ◽

Disease Gene ◽

Gene Prioritization ◽

Disease Gene Prioritization

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Improving Disease Gene Prioritization by Comparing the Semantic Similarity of Phenotypes in Mice with Those of Human Diseases

PLoS ONE ◽

10.1371/journal.pone.0038937 ◽

2012 ◽

Vol 7 (6) ◽

pp. e38937 ◽

Author(s):

Anika Oellrich ◽

Robert Hoehndorf ◽

Georgios V. Gkoutos ◽

Dietrich Rebholz-Schuhmann

Keyword(s):

Semantic Similarity ◽

Disease Gene ◽

Gene Prioritization ◽

Human Diseases ◽

Disease Gene Prioritization

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Interactogeneous: Disease Gene Prioritization Using Heterogeneous Networks and Full Topology Scores

PLoS ONE ◽

10.1371/journal.pone.0049634 ◽

2012 ◽

Vol 7 (11) ◽

pp. e49634 ◽

Author(s):

Joana P. Gonçalves ◽

Alexandre P. Francisco ◽

Yves Moreau ◽

Sara C. Madeira

Keyword(s):

Heterogeneous Networks ◽

Disease Gene ◽

Gene Prioritization ◽

Disease Gene Prioritization

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Efficient and biologically relevant consensus strategy for Parkinson’s disease gene prioritization

BMC Medical Genomics ◽

10.1186/s12920-016-0173-x ◽

2016 ◽

Vol 9 (1) ◽

Author(s):

Maykel Cruz-Monteagudo ◽

Fernanda Borges ◽

Cesar Paz-y-Miño ◽

M. Natália D. S. Cordeiro ◽

Irene Rebelo ◽

...

Keyword(s):

Parkinson’S Disease ◽

Parkinson's Disease ◽

Disease Gene ◽

Gene Prioritization ◽

Biologically Relevant ◽

Disease Gene Prioritization ◽

Consensus Strategy

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Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model

BMC Bioinformatics ◽

10.1186/s12859-016-1317-x ◽

2016 ◽

Vol 17 (1) ◽

Author(s):

Jingchao Ni ◽

Mehmet Koyuturk ◽

Hanghang Tong ◽

Jonathan Haines ◽

Rong Xu ◽

...

Keyword(s):

Network Model ◽

Disease Gene ◽

Gene Prioritization ◽

Molecular Networks ◽

Tissue Specific ◽

Disease Gene Prioritization

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DA DA: Degree-Aware Algorithms for Network-Based Disease Gene Prioritization

BioData Mining ◽

10.1186/1756-0381-4-19 ◽

2011 ◽

Vol 4 (1) ◽

Author(s):

Sinan Erten ◽

Gurkan Bebek ◽

Rob M Ewing ◽

Mehmet Koyutürk

Keyword(s):

Disease Gene ◽

Gene Prioritization ◽

Disease Gene Prioritization

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