Analysis of rhizobacterial community associated with the occurrence of Ganoderma basal stem rot disease in oil palm by Illumina next-generation sequencing

2021 ◽  
Vol 204 (1) ◽  
Author(s):  
Jakarat Anothai ◽  
Thanunchanok Chairin
2014 ◽  
Vol 11 (10) ◽  
pp. 1841-1859 ◽  
Author(s):  
Fabien Fonguimgo Tengoua ◽  
Mohamed M. Hanafi ◽  
A. S. Idris ◽  
Kadir Jugah ◽  
Jamaludin Nurul Mayziatul Azwa ◽  
...  

2005 ◽  
Vol 159 (1) ◽  
pp. 159-170 ◽  
Author(s):  
C. Utomo ◽  
S. Werner ◽  
F. Niepold ◽  
H.B. Deising

2016 ◽  
Vol 11 (1) ◽  
pp. 2-12 ◽  
Author(s):  
K. Parthiban ◽  
R. Vanitah ◽  
K. Jusoff ◽  
A.A. Nordiana ◽  
A.R. Anuar ◽  
...  

Agronomy ◽  
2021 ◽  
Vol 11 (12) ◽  
pp. 2373
Author(s):  
Izrahayu Che Hashim ◽  
Abdul Rashid Mohamed Shariff ◽  
Siti Khairunniza Bejo ◽  
Farrah Melissa Muharam ◽  
Khairulmazmi Ahmad

Basal stem rot (BSR) disease occurs due to the most aggressive and threatening fungal attack of the oil palm plant known as Ganoderma boninense (G. boninense). BSR is a disease that has a significant impact on oil palm crops in Malaysia and Indonesia. Currently, the only sustainable strategy available is to extend the life of oil palm trees, as there is no effective treatment for BSR disease. This study used thermal imagery to identify the thermal features to classify non-infected and BSR-infected trees. The aims of this study were to (1) identify the potential temperature features and (2) examine the performance of machine learning (ML) classifiers (naïve Bayes (NB), multilayer perceptron (MLP), and random forest (RF) to classify oil palm trees that are non-infected and BSR-infected. The sample size consisted of 55 uninfected trees and 37 infected trees. We used the imbalance data approaches such as random undersampling (RUS), random oversampling (ROS) and synthetic minority oversampling (SMOTE) in these classifications due to the different sample sizes. The study found that the Tmax feature is the most beneficial temperature characteristic for classifying non-infected or infected BSR trees. Meanwhile, the ROS approach improves the curve region (AUC) and PRC results compared to a single approach. The result showed that the temperature feature Tmax and combination feature TmaxTmin had a higher correct classification for the G. boninense non-infected and infected oil palm trees for the ROS-RF and had a robust success rate, classifying correctly 87.10% for non-infected and 100% for infected by G. boninense. In terms of model performance using the most significant variables, Tmax, the ROS-RF model had an excellent receiver operating characteristics (ROC) curve region (AUC) of 0.921, and the precision–recall curve (PRC) region gave a value of 0.902. Therefore, it can be concluded that the ROS-RF, using the Tmax, can be used to predict BSR disease with relatively high accuracy.


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