Complete genome sequence of a bovine ephemeral fever virus JT02L strain in mainland China

2017 ◽  
Vol 162 (11) ◽  
pp. 3555-3558 ◽  
Author(s):  
Shandian Gao ◽  
Junzheng Du ◽  
Zhancheng Tian ◽  
Qingli Niu ◽  
Fuying Zheng ◽  
...  
2019 ◽  
Vol 8 (41) ◽  
Author(s):  
Daniel L. W. Dorey-Robinson ◽  
Mar Fernández de Marco ◽  
Luis M. Hernández-Triana ◽  
Arran J. Folly ◽  
Lorraine M. McElhinney ◽  
...  

Here, we report the first complete genome of a bovine ephemeral fever virus (BEFV) isolate from an infected bovine in Israel. The genome shares 95.3% identity with a Turkish genomic sequence but contains α3 and γ open reading frames that are truncated compared to those of existing BEFV genome sequences.


2018 ◽  
Vol 6 (24) ◽  
Author(s):  
Neelam Tomar ◽  
Veena Sharma ◽  
Jeny K. John ◽  
Menaka Sethi ◽  
Pradeep K. Ray ◽  
...  

ABSTRACT The complete genome sequence of classical swine fever virus (CSFV) strain CSFV-UP-BR-KHG-06, from genotype 2.2, was determined. Comparative analysis based on the amino acid sequence of some important B-cell epitopes, T-cell epitopes, glycosylation sites, and conformational residues showed the striking differences between the group 2 virus KHG-06 and the vaccine strains HCLV/India and C-strain.


2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Chaochao Lv ◽  
Qingyuan Yang ◽  
Xiaojing Gao ◽  
Yali Yao ◽  
Xiangdong Li ◽  
...  

We report here the complete genome sequence of HeN1505, a field isolate of classical swine fever virus belonging to the new subgenotype 2.1d. HeN1505 distinguishes itself from other classical swine fever virus (CSFVs) by 1 amino acid substitution in position 159 (threonine by isoleucine), which led to the loss of one N -glycosylation site in the N pro protein.


2008 ◽  
Vol 5 (1) ◽  
pp. 7 ◽  
Author(s):  
Darja Duh ◽  
Stuart T Nichol ◽  
Marina L Khristova ◽  
Ana Saksida ◽  
Iva Hafner-Bratkovič ◽  
...  

2015 ◽  
Vol 3 (1) ◽  
Author(s):  
Anuj Ahuja ◽  
Uttaran Bhattacharjee ◽  
Amit Kumar Chakraborty ◽  
Amarjit Karam ◽  
Sandeep Ghatak ◽  
...  

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Yi-Wen Wang ◽  
Hua Yue ◽  
Weihuan Fang ◽  
Yao-Wei Huang

We report the first complete genome sequence of porcine deltacoronavirus (PDCoV) strain CH/Sichuan/S27/2012 identified in feces of diarrheic piglets from mainland China in 2012. This strain has two unique in-frame deletions within the ORF1a gene and is phylogenetically between the prototype PDCoV (HKU15) and the 2014 U.S. strains.


2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Lin Liu ◽  
Wei Wu ◽  
Xiang Zhao ◽  
Ying Xiong ◽  
Shuo Zhang ◽  
...  

The first case of Zika virus infection was identified in a Chinese traveler returning from Venezuela in February 2016. This report describes the complete genome sequence of Zika virus from the first imported case in China. The genome sequence analysis showed that the Zika virus isolated in this case belongs to the Asian lineage.


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