scholarly journals Molecular characterization of lipoxygenase genes and their expression analysis against biotic and abiotic stresses in Panax ginseng

2016 ◽  
Vol 145 (2) ◽  
pp. 331-343 ◽  
Author(s):  
Kwi-Sik Bae ◽  
Shadi Rahimi ◽  
Yu-Jin Kim ◽  
Balusamy Sri Renuka Devi ◽  
Altanzul Khorolragchaa ◽  
...  
Keyword(s):  
Molecular Characterization ◽  
Panax Ginseng ◽  
Expression Analysis ◽  
Abiotic Stresses ◽  
Biotic And Abiotic Stresses

scholarly journals Molecular characterization of 5-chlorophyll a/b-binding protein genes from Panax ginseng Meyer and their expression analysis during abiotic stresses

2016 ◽  
Vol 54 (3) ◽  
pp. 446-458 ◽  
Author(s):  
J. Silva ◽  
Y. J. Kim ◽  
J. Sukweenadhi ◽  
S. Rahimi ◽  
W. S. Kwon ◽  
...  
Keyword(s):  
Molecular Characterization ◽  
Chlorophyll A ◽  
Panax Ginseng ◽  
Expression Analysis ◽  
Abiotic Stresses ◽  
Binding Protein

scholarly journals Molecular characterization of two glutathione peroxidase genes of Panax ginseng and their expression analysis against environmental stresses

Gene ◽  
2014 ◽  
Vol 535 (1) ◽  
pp. 33-41 ◽  
Author(s):  
Yu-Jin Kim ◽  
Moon-Gi Jang ◽  
Hae-Yong Noh ◽  
Hye-Jin Lee ◽  
Johan Sukweenadhi ◽  
...  
Keyword(s):  
Glutathione Peroxidase ◽  
Molecular Characterization ◽  
Panax Ginseng ◽  
Expression Analysis ◽  
Environmental Stresses

Characterization of Nucleotide Binding ­Site-Encoding Genes in Sweetpotato, Ipomoea batatas(L.) Lam., and Their Response to Biotic and Abiotic Stresses

2021 ◽  
pp. 1-15
Author(s):  
Zengzhi Si ◽  
Yake Qiao ◽  
Kai Zhang ◽  
Zhixin Ji ◽  
Jinling Han
Keyword(s):  
Binding Site ◽  
Abiotic Stresses ◽  
Ipomoea Batatas ◽  
Expression Profiles ◽  
Nucleotide Binding ◽  
Regulatory Elements ◽  
Nucleotide Binding Site ◽  
Biotic And Abiotic Stresses ◽  
Encoding Genes

Sweetpotato, <i>Ipomoea batatas</i> (L.) Lam., is an important and widely grown crop, yet its production is affected severely by biotic and abiotic stresses. The nucleotide binding site (NBS)-encoding genes have been shown to improve stress tolerance in several plant species. However, the characterization of NBS-encoding genes in sweetpotato is not well-documented to date. In this study, a comprehensive analysis of NBS-encoding genes has been conducted on this species by using bioinformatics and molecular biology methods. A total of 315 NBS-encoding genes were identified, and 260 of them contained all essential conserved domains while 55 genes were truncated. Based on domain architectures, the 260 NBS-encoding genes were grouped into 6 distinct categories. Phylogenetic analysis grouped these genes into 3 classes: TIR, CC (I), and CC (II). Chromosome location analysis revealed that the distribution of NBS-encoding genes in chromosomes was uneven, with a number ranging from 1 to 34. Multiple stress-related regulatory elements were detected in the promoters, and the NBS-encoding genes’ expression profiles under biotic and abiotic stresses were obtained. According to the bioinformatics analysis, 9 genes were selected for RT-qPCR analysis. The results revealed that <i>IbNBS75</i>, <i>IbNBS219</i>, and <i>IbNBS256</i> respond to stem nematode infection; <i>Ib­NBS240</i>, <i>IbNBS90</i>, and <i>IbNBS80</i> respond to cold stress, while <i>IbNBS208</i>, <i>IbNBS71</i>, and <i>IbNBS159</i> respond to 30% PEG treatment. We hope these results will provide new insights into the evolution of NBS-encoding genes in the sweetpotato genome and contribute to the molecular breeding of sweetpotato in the future.

Identification and expression analysis of WRKY family genes under biotic and abiotic stresses in Brassica rapa

2014 ◽  
Vol 290 (1) ◽  
pp. 79-95 ◽  
Author(s):  
Md. Abdul Kayum ◽  
Hee-Jeong Jung ◽  
Jong-In Park ◽  
Nasar Uddin Ahmed ◽  
Gopal Saha ◽  
...  
Keyword(s):  
Brassica Rapa ◽  
Expression Analysis ◽  
Abiotic Stresses ◽  
Biotic And Abiotic Stresses

Molecular characterization of a pepper C2 domain-containing SRC2 protein implicated in resistance against host and non-host pathogens and abiotic stresses

Planta ◽  
2008 ◽  
Vol 227 (5) ◽  
pp. 1169-1179 ◽  
Author(s):  
Young-Cheol Kim ◽  
Soo-Yong Kim ◽  
Doil Choi ◽  
Choong-Min Ryu ◽  
Jeong Mee Park
Keyword(s):  
Molecular Characterization ◽  
Abiotic Stresses ◽  
C2 Domain

Expression analysis and molecular characterization of aquaporins in Rhodnius prolixus

2013 ◽  
Vol 59 (11) ◽  
pp. 1140-1150 ◽  
Author(s):  
Fernanda Staniscuaski ◽  
Jean-Paul Paluzzi ◽  
Rafael Real-Guerra ◽  
Célia R. Carlini ◽  
Ian Orchard
Keyword(s):  
Molecular Characterization ◽  
Expression Analysis ◽  
Rhodnius Prolixus

Molecular characterization of sweetpotato peroxidase SWPA4 promoter that responds to abiotic stresses and pathogen infection

2009 ◽  
Author(s):  
Sun-Hwa Ryu ◽  
Yun-Hee Kim ◽  
Cha Young Kim ◽  
Soo-Young Park ◽  
Suk-Yoon Kwon ◽  
...  
Keyword(s):  
Molecular Characterization ◽  
Abiotic Stresses ◽  
Pathogen Infection
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