Deep Semantic Segmentation of Kidney and Space-Occupying Lesion Area Based on SCNN and ResNet Models Combined with SIFT-Flow Algorithm

2018 ◽  
Vol 43 (1) ◽  
Author(s):  
Kai-jian Xia ◽  
Hong-sheng Yin ◽  
Yu-dong Zhang
2018 ◽  
Author(s):  
Xia Kaijian

BACKGROUND Renal segmentation is one of the most fundamental and challenging tasks in computer aided diagnosis systems. OBJECTIVE In order to overcome the shortcomings of automatic kidney segmentation based on deep network for abdominal CT images, a two-stage semantic segmentation of kidney and space-occupying lesion area based on SCNN and ResNet models combined with SIFT-flow transformation is proposed in paper, METHODS To facilitate the image retrieval, a Metric Learning-based approach is firstly proposed to construct a deep convolutional neural network structure using SCNN and ResNet network to extract image features and minimize the impact of interference factors on features, so as to obtain the ability to represent the abdominal CT scan image with the same angle under different imaging conditions. And then, SIFT Flow transformation is introduced, which adopts MRF to fuse label information, priori spatial information and smoothing information to establish the dense matching relationship of pixels so that the semantics can be transferred from the known image to the target image to obtain the semantic segmentation result of kidney and space-occupying lesion area. RESULTS In order to validate effectiveness and efficiency of our proposed method, we conduct experiments on self-establish CT dataset, focus on kidney organ and most of which have tumors inside of the kidney, and abnormal deformed shape of kidney. The experimental results qualitatively and quantitatively show that the accuracy of kidney segmentation is greatly improved, and the key information of the proportioned tumor occupying a small area of the image are exhibited a good segmentation results. CONCLUSIONS The proposed segmentation algorithm can be effectively applied in clinical diagnosis, help doctors to assist diagnosis, greatly improve the efficiency of work, less error probability.


2018 ◽  
Author(s):  
Xia Kaijian

BACKGROUND Renal segmentation is one of the most fundamental and challenging tasks in computer aided diagnosis systems. OBJECTIVE In order to overcome the shortcomings of automatic kidney segmentation based on deep network for abdominal CT images, a two-stage semantic segmentation of kidney and space-occupying lesion area based on SCNN and ResNet models combined with SIFT-flow transformation is proposed in paper METHODS which is divided into two stages: image retrieval and semantic segmentation. To facilitate the image retrieval, a Metric Learning-based approach is firstly proposed to construct a deep convolutional neural network structure using SCNN and ResNet network to extract image features and minimize the impact of interference factors on features, so as to obtain the ability to represent the abdominal CT scan image with the same angle under different imaging conditions. And then, SIFT Flow transformation is introduced, which adopts MRF to fuse label information, priori spatial information and smoothing information to establish the dense matching relationship of pixels so that the semantics can be transferred from the known image to the target image to obtain the semantic segmentation result of kidney and space-occupying lesion area. RESULTS In order to validate effectiveness and efficiency of our proposed method, we conduct experiments on self-establish CT dataset, focus on kidney organ and most of which have tumors inside of the kidney, and abnormal deformed shape of kidney. The experimental results qualitatively and quantitatively show that the accuracy of kidney segmentation is greatly improved, and the key information of the proportioned tumor occupying a small area of the image are exhibited a good segmentation results. CONCLUSIONS The proposed segmentation algorithm can be effectively applied in clinical diagnosis, help doctors to assist diagnosis, greatly improve the efficiency of work, less error probability.


2005 ◽  
Vol 44 (S 01) ◽  
pp. S46-S50 ◽  
Author(s):  
M. Dawood ◽  
N. Lang ◽  
F. Büther ◽  
M. Schäfers ◽  
O. Schober ◽  
...  

Summary:Motion in PET/CT leads to artifacts in the reconstructed PET images due to the different acquisition times of positron emission tomography and computed tomography. The effect of motion on cardiac PET/CT images is evaluated in this study and a novel approach for motion correction based on optical flow methods is outlined. The Lukas-Kanade optical flow algorithm is used to calculate the motion vector field on both simulated phantom data as well as measured human PET data. The motion of the myocardium is corrected by non-linear registration techniques and results are compared to uncorrected images.


2018 ◽  
Vol 12 ◽  
pp. 25-41
Author(s):  
Matthew C. FONTAINE

Among the most interesting problems in competitive programming involve maximum flows. However, efficient algorithms for solving these problems are often difficult for students to understand at an intuitive level. One reason for this difficulty may be a lack of suitable metaphors relating these algorithms to concepts that the students already understand. This paper introduces a novel maximum flow algorithm, Tidal Flow, that is designed to be intuitive to undergraduate andpre-university computer science students.


2018 ◽  
Vol 11 (6) ◽  
pp. 304
Author(s):  
Javier Pinzon-Arenas ◽  
Robinson Jimenez-Moreno ◽  
Ruben Hernandez-Beleno

2020 ◽  
Vol 64 (4) ◽  
pp. 40412-1-40412-11
Author(s):  
Kexin Bai ◽  
Qiang Li ◽  
Ching-Hsin Wang

Abstract To address the issues of the relatively small size of brain tumor image datasets, severe class imbalance, and low precision in existing segmentation algorithms for brain tumor images, this study proposes a two-stage segmentation algorithm integrating convolutional neural networks (CNNs) and conventional methods. Four modalities of the original magnetic resonance images were first preprocessed separately. Next, preliminary segmentation was performed using an improved U-Net CNN containing deep monitoring, residual structures, dense connection structures, and dense skip connections. The authors adopted a multiclass Dice loss function to deal with class imbalance and successfully prevented overfitting using data augmentation. The preliminary segmentation results subsequently served as the a priori knowledge for a continuous maximum flow algorithm for fine segmentation of target edges. Experiments revealed that the mean Dice similarity coefficients of the proposed algorithm in whole tumor, tumor core, and enhancing tumor segmentation were 0.9072, 0.8578, and 0.7837, respectively. The proposed algorithm presents higher accuracy and better stability in comparison with some of the more advanced segmentation algorithms for brain tumor images.


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