Geographically distant isolates of the persistent southern tomato virus (STV) show very low genetic diversity in the putative coat protein gene

Virus Genes ◽  
2020 ◽  
Vol 56 (5) ◽  
pp. 668-672
Author(s):  
L. Elvira-González ◽  
L. Rubio ◽  
L. Galipienso
Keyword(s):  
Genetic Diversity ◽  
Coat Protein ◽  
Coat Protein Gene ◽  
Protein Gene ◽  
Low Genetic Diversity ◽  
Putative Coat Protein

Low Genetic Diversity of the Coat Protein Gene among Blueberry Red Ringspot Virus Isolates

2012 ◽  
Vol 160 (10) ◽  
pp. 603-605 ◽  
Author(s):  
Elżbieta Kalinowska ◽  
Elżbieta Paduch-Cichal ◽  
Maria Chodorska
Keyword(s):  
Genetic Diversity ◽  
Coat Protein ◽  
Coat Protein Gene ◽  
Protein Gene ◽  
Ringspot Virus ◽  
Low Genetic Diversity ◽  
Virus Isolates

scholarly journals Geographically distant isolates of the crinivirus Cucurbit yellow stunting disorder virus show very low genetic diversity in the coat protein gene

2001 ◽  
Vol 82 (4) ◽  
pp. 929-933 ◽  
Author(s):  
Luis Rubio ◽  
Yusuf Abou-Jawdah ◽  
Han-Xin Lin ◽  
Bryce W. Falk
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Genetic Variation ◽  
Coat Protein ◽  
Coat Protein Gene ◽  
Protein Gene ◽  
Single Strand Conformation Polymorphism ◽  
Sequence Analyses ◽  
Low Genetic Diversity ◽  
Conformation Polymorphism

The population structure and genetic variation of Cucurbit yellow stunting disorder virus (CYSDV) isolates were estimated by single-strand conformation polymorphism and nucleotide sequence analyses of the CYSDV coat protein gene. Analysis of 71 isolates collected from Spain, Jordan, Turkey, Lebanon, Saudi Arabia and North America showed that, from a genetic viewpoint, these isolates could be divided into two diverged subpopulations: an Eastern subpopulation composed of Saudi Arabian isolates and a Western subpopulation containing the rest of the CYSDV isolates. The genetic variation within the Western subpopulation was very small (nucleotide identity >99%) in spite of the extensive and discontinuous geographical distribution and different years of collection. We also estimated the within-isolate genetic structure and variation of three CYSDV isolates by analysing 30 clones per isolate. Our results showed that these CYSDV isolates had a quasispecies structure.

scholarly journals Comparative genetic diversity of potato virus Y populations based on coat protein gene

2017 ◽  
Vol 61 (02) ◽  
pp. 161-174
Author(s):  
H. HOSSEINI ◽  
M. MEHRVAR ◽  
M. ZAKIAGHL ◽  
M. SIAMPOUR
Keyword(s):  
Genetic Diversity ◽  
Coat Protein ◽  
Potato Virus ◽  
Coat Protein Gene ◽  
Potato Virus Y ◽  
Protein Gene

Genetic diversity and evidence of recombination in the coat protein gene of Onion yellow dwarf virus

2015 ◽  
Vol 142 (2) ◽  
pp. 377-387
Author(s):  
Maria Bereda ◽  
Elżbieta Paduch-Cichal ◽  
Elżbieta Kalinowska ◽  
Marek Stefan Szyndel
Keyword(s):  
Genetic Diversity ◽  
Coat Protein ◽  
Coat Protein Gene ◽  
Protein Gene ◽  
Yellow Dwarf ◽  
Dwarf Virus ◽  
Onion Yellow Dwarf Virus ◽  
Yellow Dwarf Virus
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