scholarly journals 23rd Sanibel Conference on Mass Spectrometry: From Fragmentation Mechanisms to Sequencing: Tandem Mass Spectrometry Based Peptide and Protein Identification

2012 ◽  
Vol 23 (4) ◽  
pp. 575-576 ◽  
Author(s):  
Béla Paizs ◽  
Matthias Mann
Keyword(s):  
Mass Spectrometry ◽  
Tandem Mass Spectrometry ◽  
Protein Identification ◽  
Tandem Mass ◽  
Fragmentation Mechanisms

Data Mining in Protein Identification by Tandem Mass Spectrometry

2011 ◽  
pp. 472-478
Author(s):  
Haipeng Wang
Keyword(s):  
Mass Spectrometry ◽  
Data Mining ◽  
Tandem Mass Spectrometry ◽  
Large Scale ◽  
Protein Identification ◽  
Peptide Fragmentation ◽  
Tandem Mass ◽  
Fragmentation Pattern ◽  
Post Translational Modification ◽  
Challenges And Opportunities

Protein identification (sequencing) by tandem mass spectrometry is a fundamental technique for proteomics which studies structures and functions of proteins in large scale and acts as a complement to genomics. Analysis and interpretation of vast amounts of spectral data generated in proteomics experiments present unprecedented challenges and opportunities for data mining in areas such as data preprocessing, peptide-spectrum matching, results validation, peptide fragmentation pattern discovery and modeling, and post-translational modification (PTM) analysis. This article introduces the basic concepts and terms of protein identification and briefly reviews the state-of-the-art relevant data mining applications. It also outlines challenges and future potential hot spots in this field.

Studies of the Fragmentation Mechanisms of Deprotonated Lignin Model Compounds in Tandem Mass Spectrometry

2020 ◽  
Vol 92 (17) ◽  
pp. 11895-11903
Author(s):  
Jifa Zhang ◽  
Erlu Feng ◽  
Wanru Li ◽  
Huaming Sheng ◽  
Jacob R. Milton ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Tandem Mass Spectrometry ◽  
Tandem Mass ◽  
Model Compounds ◽  
Lignin Model Compounds ◽  
Fragmentation Mechanisms ◽  
Lignin Model

scholarly journals EBP, a Program for Protein Identification Using Multiple Tandem Mass Spectrometry Datasets

2006 ◽  
Vol 6 (3) ◽  
pp. 527-536 ◽  
Author(s):  
Thomas S. Price ◽  
Margaret B. Lucitt ◽  
Weichen Wu ◽  
David J. Austin ◽  
Angel Pizarro ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Tandem Mass Spectrometry ◽  
Protein Identification ◽  
Tandem Mass
Sign in / Sign up

Export Citation Format

Share Document