Characterization of RNA synthesized at high ionic strength by rat liver aggregate RNA polymerase

1969 ◽  
Vol 35 (6) ◽  
pp. 868-874 ◽  
Author(s):  
J.L. Mandel ◽  
P. Chambon
1969 ◽  
Vol 112 (5) ◽  
pp. 721-727 ◽  
Author(s):  
F. Novello ◽  
F. Stirpe

1. The conditions affecting the activity of RNA polymerase in isolated rat liver nuclei were studied with Mg2+ or Mn2+ as activating ions. 2. The enzyme assayed with Mg2+ and at low ionic strength is saturated by a lower concentration of nucleotide substrates than if assayed with Mn2+ at low ionic strength or with either ion at high ionic strength. 3. At low and at high ionic strength the incorporation of AMP is affected in a similar way by variations in the temperature of incubation. Preincubation at 37° impairs the AMP incorporation. 4. Heparin stimulates the RNA polymerase activity in the presence of Mn2+. 5. Both ammonium sulphate and heparin ‘restart’ the reaction if added after 15min., the effect being more marked with ammonium sulphate than with heparin, and also more marked in the presence of Mn2+ than of Mg2+. 6. α-Amanitin abolishes the effect of ammonium sulphate and of heparin.


1971 ◽  
Vol 142 (2) ◽  
pp. 489-500 ◽  
Author(s):  
John D. Johnson ◽  
Barbara A. Jant ◽  
Seymour Kaufman ◽  
Louis Sokoloff

1974 ◽  
Vol 140 (3) ◽  
pp. 565-567 ◽  
Author(s):  
P. Davies ◽  
K. Griffiths

Stimulation of prostatic RNA polymerase in vitro by prostatic 17β-hydroxy-5α-androstan-3-one (5α-dihydrotestosterone)–receptor complexes has been previously reported. By use of the selective inhibitor, α-amanitin, we have shown that both nucleolar and extranucleolar RNA polymerase activities may be stimulated, but stimulation is abolished at high ionic strength.


1978 ◽  
Vol 176 (1) ◽  
pp. 97-102 ◽  
Author(s):  
B Grandchamp ◽  
N Phung ◽  
Y Nordmann

The location of coproporphyrinogen III oxidase in mitochondria was studied in rat liver by using the digitonin method or hypo-osmotic media for fractionation. The enzyme was found in the intermembrane space with a fraction loosely bound to the inner membrane. This fraction was released by washing the inner-membrane-matrix complex with alkaline solutions or solutions of high ionic strength. The enzyme in both fractions had the same Km (0.16 micrometer) for coproporphyrinogen III. When incubation was performed in a medium that avoided destruction of enzyme membrane binding, a dramatic increase in activity was observed after sonication of whole mitochondria or of the inner-membrane-matrix complex.


1972 ◽  
Vol 50 (6) ◽  
pp. 644-653 ◽  
Author(s):  
I. S. Mendelson ◽  
K. M. Anderson

RNA synthesis catalyzed by nuclei isolated from mammary glands of pregnant and lactating rats and from 7,12-dimethylbenz(α)anthracene-induced mammary tumors was examined, and the following observations were made.(1) Assay 1 (6 mM Mg2+, low ionic strength, nucleolar polymerase I), and assay 3 (2 mM Mg2+, 1.6 mM Mn2+, 0.3 M ammonium sulfate, high ionic strength, nucleoplasmic polymerase II) promoted synthesis of ribosomal-like (rRNA) and nonribosomal-like RNA (dRNA), respectively, as verified by differential sensitivity to actinomycin D, double-labelling experiments, and response to α-amanitin.(2) Synthesis of a rRNA-like product was increased in assay 2 (6 mM Mg2+, 0.02 M ammonium sulfate), compared with assay 1; in assay 3 increased formation of a more dRNA-like product occurred. Stimulation of mammary gland nuclear RNA synthesis by ammonium sulfate is biphasic, similar to the response of rat liver and sea urchin nuclei.(3) In assay 1, more rRNA was synthesized at 30° than at 37°; in assay 3 somewhat greater synthesis of dRNA occurred at 37° compared with 30°. The pH optima in assays 1 and 3 of 8.0 and 8.5, respectively, are the opposite of those reported for rat liver nuclei.(4) During pregnancy, isolated nuclei synthesized more dRNA-like product, compared to lactation; nuclei from lactating glands formed more rRNA, than during pregnancy. Nuclei from slowly growing tumors (Ts) examined in the three assays were 30–50% as active, while those from rapidly growing tumors (Tf) exceeded the activities of nuclei from pregnant (P) or lactating (L) rats.(5) P, L, and Ts nuclei incubated in assay 3 with α-amanitin were inhibited about 60%, compared to an 80% reduction with nuclei from tumors that were growing rapidly. The ratio of the base G to either A or U did not return to that of assay 1 or 2 (rRNA). This result is consistent with the presence of a third nucleoplasmic RNA polymerase (enzyme "III"), as described with rat liver and sea urchin nuclei.(6) Nuclei from proliferating normal and neoplastic tissues exhibited greater polymerase II activity, and the ratio of nucleoplasmic to nucleolar enzyme activity was increased. Changes in activities of enzyme II and enzyme "III" do not appear to be necessarily coordinate.(7) The pattern of polymerase activity in P and L nuclei is probably related to cellular proliferation and/or hypertrophy during pregnancy, and cellular function represented by milk protein synthesis with lactation. RNA polymerase activity in T nuclei correlated with the growth rate of the parent tumor and not with its histology, at least not in any simple way.


1979 ◽  
Vol 183 (1) ◽  
pp. 43-54 ◽  
Author(s):  
T J C Beebee

Nuclei were prepared from rat liver after homogenization of the tissue in hyperosmotic sucrose and RNA polymerases (EC 2.7.7.6) extracted by two methods applied sequentially. Optimal conditions for washing loosely bound enzymes out of nuclei were determined first, and involved short (10 min) incubations at 0 degrees C in the presence of 5 mM-Mg2+ and 60 mM-(NH4)2SO4. Subsequent sonication of the residual nuclear pellet after resuspension and lysis at high ionic strength resulted in further release of RNA polymerases. The primary wash yielded about 2 × 10(4) molecules of RNA polymerases I and III (altogether) and 1 × 10(4) molecules of form-II enzymes per original nucleus, whereas subsequent sonication released 2 × 10(4)-2.5 × 10(4) form-I and -III enzyme molecules (altogether) and a further 7 × 10(3)-8 × 10(3) form-II enzyme molecules, as measured by end-labelling of nascent RNA. RNA polymerase II was partially purified from both types of extracts and shown to initiate very poorly on high-molecular-weight homologous DNA irrespective of the source of the enzyme.


1977 ◽  
Vol 165 (2) ◽  
pp. 237-245 ◽  
Author(s):  
E Pays

At low ionic strength and with a low exogenous RNA polymerase/DNA ratio, rat liver chromatin directs the synthesis in vitro of RNA sequences rich in double-stranded segments. All the transcripts contain at least one double-stranded sequence. Most of the double-stranded segments are formed by intramolecular base-pairing of inverted complementary sequences separated by a single-stranded loop. They are heterogeneous in size, 35-45% of them being more than 80 nucleotides long. They contain 61-64% G+C, whether synthesized by rat liver RNA polymerase (form B) or Escherichia coli RNA polymerase. The largest double-stranded sequences are found in the largest transcripts, and are the most thermostable. The fidelity of base-matching is better in double-stranded transcripts synthesized on rat liver chromatin by homologous polymerase than in those synthesized on it by a bacterial polymerase, or in those synthesized by either of the two polymerases on pure DNA.


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