scholarly journals All Atom Molecular Dynamics Simulations of pH Dependent Surfactants

2013 ◽  
Vol 104 (2) ◽  
pp. 664a
Author(s):  
Brian Morrow ◽  
Peter H. Koenig ◽  
David Eike ◽  
Jana K. Shen
2020 ◽  
Vol 295 (43) ◽  
pp. 14563-14564
Author(s):  
John C. Hackett

Some plant proteases contain a latent sequence known as the plant-specific insert (PSI) that, upon release from the full protease sequence, initiates membrane fusion to defend from pathogens. However, the mechanism by which it exerts its effects has been unclear. Zhao et al. report an elegant integration of biophysical experiments and molecular dynamics simulations to reveal events leading up to PSI-mediated membrane fusion. Their results demonstrate a pH-dependent monomer-to-dimer transition, clear evidence of membrane association, and probable structures of prefusion intermediates. These data expand our understanding of the elusive PSIs and may provide new directions for antimicrobial development.


Nanoscale ◽  
2019 ◽  
Vol 11 (15) ◽  
pp. 7371-7385 ◽  
Author(s):  
Zhiqiang Shen ◽  
William Baker ◽  
Huilin Ye ◽  
Ying Li

We systematically study the aggregation of pH-responsive AuNPs and their interactions with model lipid bilayers by using Martini coarse-grained molecular dynamics simulations.


2017 ◽  
Vol 4 (10) ◽  
pp. 1935-1943 ◽  
Author(s):  
Huan Tang ◽  
Ying Zhao ◽  
Xiaonan Yang ◽  
Dongmei Liu ◽  
Sujie Shan ◽  
...  

Mechanism of the pH-dependent adsorption efficiency.


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