Goodbye PAM: Phage λ’s Red recombination system cripples PAMs and helps dodge CRISPR attacks

2021 ◽  
Vol 29 (10) ◽  
pp. 1469-1471
Author(s):  
Khang Ho ◽  
Rasika M. Harshey
2013 ◽  
Vol 98 (5) ◽  
pp. 2165-2172 ◽  
Author(s):  
Shengbiao Hu ◽  
Jun Fu ◽  
Fan Huang ◽  
Xuezhi Ding ◽  
A. Francis Stewart ◽  
...  

2020 ◽  
Vol 20 (5) ◽  
Author(s):  
Bo Ye ◽  
Zhenjun Zhao ◽  
Dongmei Yue ◽  
Peipei Li ◽  
Linmei Wang ◽  
...  

Abstract In this study, we established the Antheraea pernyi multicapsid nucleopolyhedrovirus (AnpeNPV) bacmid system for the construction of a Bac-to-Bac expression system and the generation of virus mutants. The CopyRight pSMART BAC cloning vector harboring the chloramphenicol resistance gene was introduced into the AnpeNPV genome to produce the AnpeNPV bacmid that could be propagated in Escherichia coli with stable replication. The enhanced green fluorescent protein (EGFP) was successfully expressed in both Tn-Hi5 cells and A. pernyi pupae using the AnpeNPV Bac-to-Bac expression system. To generate the AnpeNPV mutants, we developed the AnpeNPV bacmid/λ Red recombination system that facilitated the deletion of viral genes from the AnpeNPV genome. The genes cathepsin and chitinase were deleted and a derivative AnpeNPV Bac-to-Bac expression system was constructed. Furthermore, we demonstrated that the novel expression system could be used to express human epidermal growth factor in A. pernyi pupae. Taken together, the AnpeNPV bacmid system provides a powerful tool to create the AnpeNPV Bac-to-Bac expression system for protein expression in A. pernyi pupae. Further, it helps to knock-out genes from the AnpeNPV genome with λ Red recombination system for identification of the role of viral genes involved in regulating gene expression, DNA replication, virion structure, and infectivity during the AnpeNPV infection process.


Gene ◽  
2009 ◽  
Vol 438 (1-2) ◽  
pp. 57-64 ◽  
Author(s):  
Shouji Yamamoto ◽  
Hidemasa Izumiya ◽  
Masatomo Morita ◽  
Eiji Arakawa ◽  
Haruo Watanabe

2012 ◽  
Vol 63 (3) ◽  
pp. 951-956 ◽  
Author(s):  
Xinxi Gu ◽  
Chen Li ◽  
Yi Cai ◽  
Hui Dong ◽  
Wentao Xu ◽  
...  

2021 ◽  
Vol 22 (19) ◽  
pp. 10558
Author(s):  
Estéfani García-Ríos ◽  
Julia Gata-de-Benito ◽  
Mireia López-Siles ◽  
Michael J. McConnell ◽  
Pilar Pérez-Romero

Human cytomegalovirus (HCMV) continues to be a major cause of morbidity in transplant patients and newborns. However, the functions of many of the more than 282 genes encoded in the HCMV genome remain unknown. The development of bacterial artificial chromosome (BAC) technology contributes to the genetic manipulation of several organisms including HCMV. The maintenance of the HCMV BAC in E. coli cells permits the rapid generation of recombinant viral genomes that can be used to produce viral progeny in cell cultures for the study of gene function. We optimized the Lambda-Red Recombination system to construct HCMV gene deletion mutants rapidly in the complete set of tested genes. This method constitutes a useful tool that allows for the quick generation of a high number of gene deletion mutants, allowing for the analysis of the whole genome to improve our understanding of HCMV gene function. This may also facilitate the development of novel vaccines and therapeutics.


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