scholarly journals Xist Repeats B and C, but not Repeat A, mediate de novo recruitment of the Polycomb system in X chromosome inactivation

2021 ◽  
Vol 56 (9) ◽  
pp. 1234-1235
Author(s):  
Guifeng Wei ◽  
Mafalda Almeida ◽  
Joseph S. Bowness ◽  
Tatyana B. Nesterova ◽  
Neil Brockdorff

Changing DNA methylation patterns during embryonic development are discussed in relation to differential gene expression, changes in X-chromosome activity and genomic imprinting. Sperm DNA is more methylated than oocyte DNA, both overall and for specific sequences. The methylation difference between the gametes could be one of the mechanisms (along with chromatin structure) regulating initial differences in expression of parental alleles in early development. There is a loss of methylation during development from the morula to the blastocyst and a marked decrease in methylase activity. De novo methylation becomes apparent around the time of implantation and occurs to a lesser extent in extra-embryonic tissue DNA. In embryonic DNA, de novo methylation begins at the time of random X-chromosome inactivation but it continues to occur after X-chromosome inactivation and may be a mechanism that irreversibly fixes specific patterns of gene expression and X-chromosome inactivity in the female. The germ line is probably delineated before extensive de novo methylation and hence escapes this process. The marked undermethylation of the germ line DNA may be a prerequisite for X-chromosome reactivation. The process underlying reactivation and removal of parent-specific patterns of gene expression may be changes in chromatin configuration associated with meiosis and a general reprogramming of the germ line to developmental totipotency.


2013 ◽  
Vol 33 (7) ◽  
pp. 1150-1155 ◽  
Author(s):  
Boonchai Boonyawat ◽  
Santhosh Dhanraj ◽  
Fahad al Abbas ◽  
Bozana Zlateska ◽  
Eyal Grunenbaum ◽  
...  

2019 ◽  
Vol 138 (11-12) ◽  
pp. 1313-1322 ◽  
Author(s):  
Alejandro Horga ◽  
Catherine E. Woodward ◽  
Alberto Mills ◽  
Isabel Pareés ◽  
Iain P. Hargreaves ◽  
...  

Abstract Pyruvate dehydrogenase complex (PDC) deficiency caused by mutations in the X-linked PDHA1 gene has a broad clinical presentation, and the pattern of X-chromosome inactivation has been proposed as a major factor contributing to its variable expressivity in heterozygous females. Here, we report the first set of monozygotic twin females with PDC deficiency, caused by a novel, de novo heterozygous missense mutation in exon 11 of PDHA1 (NM_000284.3: c.1100A>T). Both twins presented in infancy with a similar clinical phenotype including developmental delay, episodes of hypotonia or encephalopathy, epilepsy, and slowly progressive motor impairment due to pyramidal, extrapyramidal, and cerebellar involvement. However, they exhibited clear differences in disease severity that correlated well with residual PDC activities (approximately 60% and 20% of mean control values, respectively) and levels of immunoreactive E1α subunit in cultured skin fibroblasts. To address whether the observed clinical and biochemical differences could be explained by the pattern of X-chromosome inactivation, we undertook an androgen receptor assay in peripheral blood. In the less severely affected twin, a significant bias in the relative activity of the two X chromosomes with a ratio of approximately 75:25 was detected, while the ratio was close to 50:50 in the other twin. Although it may be difficult to extrapolate these results to other tissues, our observation provides further support to the hypothesis that the pattern of X-chromosome inactivation may influence the phenotypic expression of the same mutation in heterozygous females and broadens the clinical and genetic spectrum of PDC deficiency.


Nature ◽  
2005 ◽  
Vol 438 (7066) ◽  
pp. 369-373 ◽  
Author(s):  
Ikuhiro Okamoto ◽  
Danielle Arnaud ◽  
Patricia Le Baccon ◽  
Arie P. Otte ◽  
Christine M. Disteche ◽  
...  

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