scholarly journals Sequence polymorphism data of the hypervariable regions of mitochondrial DNA in the Yadav population of Haryana

Data in Brief ◽  
2018 ◽  
Vol 18 ◽  
pp. 164-171
Author(s):  
Kapil Verma ◽  
Sapna Sharma ◽  
Arun Sharma ◽  
Jyoti Dalal ◽  
Tapeshwar Bhardwaj
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Polymorphism ◽  
Hypervariable Regions ◽  
Polymorphism Data

Sequence polymorphism of the mitochondrial DNA hypervariable regions I and II in 205 Singapore Malays

2007 ◽  
Vol 9 (1) ◽  
pp. 33-37 ◽  
Author(s):  
Hang Yee Wong ◽  
June S.W. Tang ◽  
Bruce Budowle ◽  
Marc W. Allard ◽  
Christopher K.C. Syn ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Polymorphism ◽  
Hypervariable Regions

scholarly journals Sequence polymorphism and haplogroup data of the hypervariable regions on mtDNA in Semoq Beri population

Data in Brief ◽  
2018 ◽  
Vol 21 ◽  
pp. 2609-2615 ◽  
Author(s):  
Muhamad Aidil Zahidin ◽  
Wan Bayani Wan Omar ◽  
Wan Rohani Wan Taib ◽  
Jeffrine Rovie Ryan Japning ◽  
Mohd Tajuddin Abdullah
Keyword(s):  
Sequence Polymorphism ◽  
Hypervariable Regions

Historical biogeography, mitochondrial DNA, and allozymes of Psammodromus algirus (Lacertidae): a preliminary hypothesis

2006 ◽  
Vol 27 (2) ◽  
pp. 181-193 ◽  
Author(s):  
Stephen Busack ◽  
Robin Lawson
Keyword(s):  
Mitochondrial Dna ◽  
North Africa ◽  
Genetic Change ◽  
Sequence Polymorphism ◽  
Historical Biogeography ◽  
Gene Exchange ◽  
Strait Of Gibraltar ◽  
Psammodromus Algirus

AbstractPairwise sequence polymorphism in mitochondrial DNA and levels of differentiation among presumptive gene loci (expressed as Nei's Dˆ) tend to be greater between populations separated by the Strait of Gibraltar than between populations inhabiting either Morocco or Spain. Ancestral Psammodromus algirus inhabiting Iberia and North Africa while the Strait of Gibraltar was being formed and stabilized (Miocene-Pliocene) evolved in association with physiogeographic change brought about by this barrier to gene exchange. Considered in units of genetic change per kilometer, mtDNA differentiation is greater in Morocco than in Spain, and allozyme differentiation is slightly greater than, or equal to, that in Spain, suggesting that P. algirus has a longer and more complex history in Morocco than in Spain.

Sequence Analysis of Mitochondrial DNA Hypervariable Regions: An Approach to Personal Identification

2007 ◽  
Vol 38 (3) ◽  
pp. 345-349 ◽  
Author(s):  
Saeid Morovvati ◽  
Mahasti Modarresi ◽  
Gholamreza Habibi ◽  
Yaser Kiarudi ◽  
Ali Karami ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Sequence Analysis ◽  
Personal Identification ◽  
Hypervariable Regions

A database of mitochondrial DNA hypervariable regions I and II sequences of individuals from Slovakia

2008 ◽  
Vol 2 (4) ◽  
pp. e53-e59 ◽  
Author(s):  
Ivan Lehocký ◽  
Marian Baldovič ◽  
Ľudevít Kádaši ◽  
Ene Metspalu
Keyword(s):  
Mitochondrial Dna ◽  
Hypervariable Regions

scholarly journals Ancestral polymorphisms in Drosophila pseudoobscura and Drosophila miranda

2011 ◽  
Vol 93 (4) ◽  
pp. 255-263 ◽  
Author(s):  
REUBEN W. NOWELL ◽  
BRIAN CHARLESWORTH ◽  
PENELOPE R. HADDRILL
Keyword(s):  
Balancing Selection ◽  
Molecular Data ◽  
Sequence Polymorphism ◽  
Substantial Proportion ◽  
Drosophila Pseudoobscura ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Speciation Event ◽  
Ancestral Polymorphisms ◽  
Polymorphism Data

SummaryAncestral polymorphisms are defined as variants that arose by mutation prior to the speciation event that generated the species in which they segregate. Their presence may complicate the interpretation of molecular data and lead to incorrect phylogenetic inferences. They may also be used to identify regions of the genome that are under balancing selection. It is thus important to take into account the contribution of ancestral polymorphisms to variability within species and divergence between species. Here, we extend and improve a method for estimation of the proportion of ancestral polymorphisms within a species, and apply it to a dataset of 33 X-linked and 34 autosomal protein-coding genes for which sequence polymorphism data are available in both Drosophila pseudoobscura and Drosophila miranda, using Drosophila affinis as an outgroup. We show that a substantial proportion of both X-linked and autosomal synonymous variants in these two species are ancestral, and that a small number of additional genes with unusually high sequence diversity seem to have an excess of ancestral polymorphisms, suggestive of balancing selection.

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