Comparative analysis of genomic sequences suggests that Trypanosoma cruzi CL Brener contains two sets of non-intercalated repeats of satellite DNA that correspond to T. cruzi I and T. cruzi II types

2005 ◽  
Vol 140 (2) ◽  
pp. 221-227 ◽  
Author(s):  
Maria Carolina Q.B. Elias ◽  
Nancy Vargas ◽  
Laize Tomazi ◽  
Aurélio Pedroso ◽  
Bianca Zingales ◽  
...  
Keyword(s):  
Comparative Analysis ◽  
Trypanosoma Cruzi ◽  
Satellite Dna ◽  
Genomic Sequences

Organization of satellite DNA in the genome of Trypanosoma cruzi

2003 ◽  
Vol 129 (1) ◽  
pp. 1-9 ◽  
Author(s):  
M.Carolina Q.B. Elias ◽  
Nancy S. Vargas ◽  
Bianca Zingales ◽  
Sergio Schenkman
Keyword(s):  
Trypanosoma Cruzi ◽  
Satellite Dna

Genomic organization and transcription analysis of the 195-bp satellite DNA in Trypanosoma cruzi

2008 ◽  
Vol 160 (1) ◽  
pp. 60-64 ◽  
Author(s):  
Camila Martins ◽  
Cassio Silva Baptista ◽  
Susan Ienne ◽  
Gustavo C. Cerqueira ◽  
Daniella C. Bartholomeu ◽  
...  
Keyword(s):  
Trypanosoma Cruzi ◽  
Satellite Dna ◽  
Genomic Organization ◽  
Transcription Analysis

scholarly journals Comparative Analysis of the Secretome and Interactome of Trypanosoma cruzi and Trypanosoma rangeli Reveals Species Specific Immune Response Modulating Proteins

2020 ◽  
Vol 11 ◽  
Author(s):  
Renata Watanabe Costa ◽  
Marina Ferreira Batista ◽  
Isabela Meneghelli ◽  
Ramon Oliveira Vidal ◽  
Carlos Alcides Nájera ◽  
...  
Keyword(s):  
Immune Response ◽  
Comparative Analysis ◽  
Trypanosoma Cruzi ◽  
Specific Immune Response ◽  
Trypanosoma Rangeli ◽  
Species Specific

Characterization of intronic structures and alternative splicing in Phytophthora sojae by comparative analysis of expressed sequence tags and genomic sequences

2011 ◽  
Vol 57 (2) ◽  
pp. 84-90 ◽  
Author(s):  
Danyu Shen ◽  
Wenwu Ye ◽  
Suomeng Dong ◽  
Yuanchao Wang ◽  
Daolong Dou
Keyword(s):  
Comparative Analysis ◽  
Alternative Splicing ◽  
Expressed Sequence Tags ◽  
Phytophthora Sojae ◽  
Genomic Sequences ◽  
Splice Sites ◽  
Distinct Phylogenetic Lineage ◽  
Expressed Sequence ◽  
Complete Genomic

The oomycetes, a distinct phylogenetic lineage of fungus-like microorganisms, are heterokonts (stramenopiles) belonging to the supergroup Chromalveolata. Although the complete genomic sequences of a number of oomycetes have been reported, little information regarding the introns therein is available. Here, we investigated the introns of Phytophthora sojae , a pathogen that causes soybean root and stem rot, by a comparative analysis of genomic sequences and expressed sequence tags. A total of 4013 introns were identified, of which 96.6% contained canonical splice sites. The P. sojae genome possessed features distinct from other organisms at 5′ splice sites, polypyrimidine tracts, branch sites, and 3′ splice sites. Diverse repeating sequences, ranging from 2 to 10 nucleotides in length, were found at more than half of the intron–exon boundaries. Furthermore, 122 genes underwent alternative splicing. These data indicate that P. sojae has unique splicing mechanisms, and recognition of those mechanisms may lead to more accurate predictions of the location of introns in P. sojae and even other oomycete species.

scholarly journals The Trypanosoma cruzi Satellite DNA OligoC-TesT and Trypanosoma cruzi Kinetoplast DNA OligoC-TesT for Diagnosis of Chagas Disease: A Multi-cohort Comparative Evaluation Study

2014 ◽  
Vol 8 (1) ◽  
pp. e2633 ◽  
Author(s):  
Koen De Winne ◽  
Philippe Büscher ◽  
Alejandro O. Luquetti ◽  
Suelene B. N. Tavares ◽  
Rodrigo A. Oliveira ◽  
...  
Keyword(s):  
Trypanosoma Cruzi ◽  
Chagas Disease ◽  
Satellite Dna ◽  
Comparative Evaluation ◽  
Evaluation Study ◽  
Kinetoplast Dna
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