A computational perspective for tailor-made selective Mcl-1 and Bcl-XL inhibitors

2021 ◽  
pp. 132269
Author(s):  
Danxia Huang ◽  
Ying Wang ◽  
Baichun Hu ◽  
Zhaohu Luo ◽  
Junhao Huang ◽  
...  
2018 ◽  
Vol 2018 ◽  
pp. 1-14 ◽  
Author(s):  
Eric Paquet ◽  
Herna L. Viktor

Ab initio molecular dynamics is an irreplaceable technique for the realistic simulation of complex molecular systems and processes from first principles. This paper proposes a comprehensive and self-contained review of ab initio molecular dynamics from a computational perspective and from first principles. Quantum mechanics is presented from a molecular dynamics perspective. Various approximations and formulations are proposed, including the Ehrenfest, Born–Oppenheimer, and Hartree–Fock molecular dynamics. Subsequently, the Kohn–Sham formulation of molecular dynamics is introduced as well as the afferent concept of density functional. As a result, Car–Parrinello molecular dynamics is discussed, together with its extension to isothermal and isobaric processes. Car–Parrinello molecular dynamics is then reformulated in terms of path integrals. Finally, some implementation issues are analysed, namely, the pseudopotential, the orbital functional basis, and hybrid molecular dynamics.


ACS Omega ◽  
2021 ◽  
Vol 6 (17) ◽  
pp. 11122-11130
Author(s):  
Francesca Peccati ◽  
Gonzalo Jiménez-Osés

Author(s):  
Tianwei He ◽  
You-Chao KONG ◽  
Alain Rafael Puente Santiago ◽  
Md Ariful Ahsan ◽  
Hui Pan ◽  
...  

Among all the 2D-carbon materials, graphyne is currently one of the most interesting carbon allotropes besides graphene. It has potential applications in a wide variety of scientific fields owed to...


2019 ◽  
Vol 271 ◽  
pp. 47-58 ◽  
Author(s):  
Aria Mansouri Tehrani ◽  
Jakoah Brgoch

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