scholarly journals Sparse DCM for whole-brain effective connectivity from resting-state fMRI data

NeuroImage ◽  
2020 ◽  
Vol 208 ◽  
pp. 116367 ◽  
Author(s):  
Giulia Prando ◽  
Mattia Zorzi ◽  
Alessandra Bertoldo ◽  
Maurizio Corbetta ◽  
Marco Zorzi ◽  
...  
2017 ◽  
Author(s):  
Matthieu Gilson

AbstractSince the middle of the 1990s, studies of resting-state fMRI/BOLD data have explored the correlation patterns of activity across the whole brain, which is referred to as functional connectivity (FC). Among the many methods that have been developed to interpret FC, a recently proposed model-based approach describes the propagation of fluctuating BOLD activity within the recurrently connected brain network by inferring the effective connectivity (EC). In this model, EC quantifies the strengths of directional interactions between brain regions, viewed from the proxy of BOLD activity. In addition, the tuning procedure for the model provides estimates for the local variability (input variances) to explain how the observed FC is generated. Generalizing, the network dynamics can be studied in the context of an input-output mapping - determined by EC - for the second-order statistics of fluctuating nodal activities. The present paper focuses on the following detection paradigm: observing output covariances, how discriminative is the (estimated) network model with respect to various input covariance patterns? An application with the model fitted to experimental fMRI data - movie viewing versus resting state - illustrates that changes in excitability and changes in brain coordination go hand in hand.


Author(s):  
Maksim G. Sharaev ◽  
Viktoria V. Zavyalova ◽  
Vadim L. Ushakov ◽  
Sergey I. Kartashov ◽  
Boris M. Velichkovsky

Author(s):  
Stefan Frässle ◽  
Samuel J. Harrison ◽  
Jakob Heinzle ◽  
Brett A. Clementz ◽  
Carol A. Tamminga ◽  
...  

Abstract“Resting-state” functional magnetic resonance imaging (rs-fMRI) is widely used to study brain connectivity. So far, researchers have been restricted to measures of functional connectivity that are computationally efficient but undirected, or to effective connectivity estimates that are directed but limited to small networks.Here, we show that a method recently developed for task-fMRI – regression dynamic causal modeling (rDCM) – extends to rs-fMRI and offers both directional estimates and scalability to whole-brain networks. First, simulations demonstrate that rDCM faithfully recovers parameter values over a wide range of signal-to-noise ratios and repetition times. Second, we test construct validity of rDCM in relation to an established model of effective connectivity, spectral DCM. Using rs-fMRI data from nearly 200 healthy participants, rDCM produces biologically plausible results consistent with estimates by spectral DCM. Importantly, rDCM is computationally highly efficient, reconstructing whole-brain networks (>200 areas) within minutes on standard hardware. This opens promising new avenues for connectomics.


2013 ◽  
Vol 17 (3) ◽  
pp. 365-374 ◽  
Author(s):  
Guo-Rong Wu ◽  
Wei Liao ◽  
Sebastiano Stramaglia ◽  
Ju-Rong Ding ◽  
Huafu Chen ◽  
...  

NeuroImage ◽  
2013 ◽  
Vol 82 ◽  
pp. 403-415 ◽  
Author(s):  
X. Shen ◽  
F. Tokoglu ◽  
X. Papademetris ◽  
R.T. Constable

Author(s):  
Zhen-Zhen Ma ◽  
Jia-Jia Wu ◽  
Xu-Yun Hua ◽  
Mou-Xiong Zheng ◽  
Xiang-Xin Xing ◽  
...  

NeuroImage ◽  
2021 ◽  
Vol 231 ◽  
pp. 117844
Author(s):  
Behzad Iravani ◽  
Artin Arshamian ◽  
Peter Fransson ◽  
Neda Kaboodvand

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