scholarly journals Identification of Three Sequence Motifs in the Transcription Termination Factor Sen1 that Mediate Direct Interactions with Nrd1

Structure ◽  
2019 ◽  
Vol 27 (7) ◽  
pp. 1156-1161.e4 ◽  
Author(s):  
Yinglu Zhang ◽  
Yujin Chun ◽  
Stephen Buratowski ◽  
Liang Tong
2018 ◽  
Author(s):  
Yinglu Zhang ◽  
Yujin Chun ◽  
Stephen Buratowski ◽  
Liang Tong

AbstractThe Nrd1-Nab3-Sen1 (NNS) complex carries out the transcription termination of noncoding RNAs (ncRNAs) in yeast, although the detailed interactions among its subunits remain obscure. Here we have identified three sequence motifs in Sen1 that mediate direct interactions with the RNA polymerase II CTD interaction domain (CID) of Nrd1, determined the crystal structures of these Nrd1 interaction motifs (NIMs) bound to the CID, and characterized the interactions in vitro and in yeast.


Cell ◽  
1993 ◽  
Vol 75 (1) ◽  
pp. 147-154 ◽  
Author(s):  
Mikhail Kashlev ◽  
Evgeny Nudler ◽  
Alex Goldfarb ◽  
Terry White ◽  
Elizabeth Kutter

1999 ◽  
Vol 112 (19) ◽  
pp. 3259-3268 ◽  
Author(s):  
V. Sirri ◽  
P. Roussel ◽  
D. Hernandez-Verdun

The transcription termination factor TTF-1 exerts two functions in ribosomal gene (rDNA) transcription: facilitating initiation and mediating termination of transcription. Using HeLa cells, we show that TTF-1 protein is colocalized with the active transcription machinery in the nucleolus and also with the inactive machinery present in certain mitotic nucleolar organizer regions (NORs) when rDNA transcription is repressed. We also show that TTF-1 is specifically phosphorylated during mitosis in a manner dependent on the cdc2-cyclin B kinase pathway and on an okadaic acid-sensitive phosphatase. Interestingly, the mitotically phosphorylated form of TTF-1 appearing at the G(2)/M transition phase was more easily solubilized than was the interphase form. This indicates that the chromatin-binding affinity of TTF-1 appears to be different in mitotic chromosomes compared to the interphase nucleolus. Correlated with this, the other DNA-binding factor, UBF, which interferes with chromatin conformation in the rDNA promoter, was more strongly bound to rDNA during mitosis than at interphase. The reorganization of the mitotic rDNA promoter might be induced by phosphorylation of certain components of the rDNA transcription machinery and participate in silencing of rDNA during mitosis.


1999 ◽  
Vol 3 (4) ◽  
pp. 487-493 ◽  
Author(s):  
Cynthia E. Bogden ◽  
Deborah Fass ◽  
Nick Bergman ◽  
Matthew D. Nichols ◽  
James M. Berger

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