Mechanism and Rate-Determining Factors of Amide Bond Formation through Acyl Transfer of Mixed Carboxylic–Carbamic Anhydrides: A Computational Study

2018 ◽  
Vol 83 (5) ◽  
pp. 2676-2685 ◽  
Author(s):  
Yuan-Ye Jiang ◽  
Tian-Tian Liu ◽  
Rui-Xue Zhang ◽  
Zhong-Yan Xu ◽  
Xue Sun ◽  
...  
2018 ◽  
Vol 16 (32) ◽  
pp. 5808-5815 ◽  
Author(s):  
Yuan-Ye Jiang ◽  
Tian-Tian Liu ◽  
Xue Sun ◽  
Zhong-Yan Xu ◽  
Xia Fan ◽  
...  

A systematic computational study on CS2-releasing 1,3-acyl transfer was performed for the first time and provided deeper mechanistic insights.


2017 ◽  
Vol 15 (30) ◽  
pp. 6367-6374 ◽  
Author(s):  
Song-Lin Zhang ◽  
Hai-Xing Wan ◽  
Zhu-Qin Deng

A detailed computational study is presented on the reaction mechanism of ynamide-mediated condensation of carboxylic acids with amines to produce amides, which elucidates the reactivity pattern of the coupling reagent ynamide and discloses crucial bifunctional catalytic effects of the carboxylic acid substrate during aminolysis.


Synthesis ◽  
2020 ◽  
Vol 52 (18) ◽  
pp. 2579-2599 ◽  
Author(s):  
Michal Szostak ◽  
Guangchen Li

In the past several years, tremendous advances have been made in non-classical routes for amide bond formation that involve transamidation and amidation reactions of activated amides and esters. These new methods enable the formation of extremely valuable amide bonds via transition-metal-catalyzed, transition-metal-free, or metal-free pathways by exploiting chemoselective acyl C–X (X = N, O) cleavage under mild conditions. In a broadest sense, these reactions overcome the formidable challenge of activating C–N/C–O bonds of amides or esters by rationally tackling nN → π*C=O delocalization in amides and nO → π*C=O donation in esters. In this account, we summarize the recent remarkable advances in the development of new methods for the synthesis of amides with a focus on (1) transition-metal/NHC-catalyzed C–N/C–O bond activation, (2) transition-metal-free highly selective cleavage of C–N/C–O bonds, (3) the development of new acyl-transfer reagents, and (4) other emerging methods.1 Introduction2 Transamidation of Amides2.1 Transamidation by Metal–NHC Catalysis (Pd–NHC, Ni–NHC)2.2 Transition-Metal-Free Transamidation via Tetrahedral Intermediates2.3 Reductive Transamidation2.4 New Acyl-Transfer Reagents2.5 Tandem Transamidations3 Amidation of Esters3.1 Amidation of Esters by Metal–NHC Catalysis (Pd–NHC, Ni–NHC)3.2 Transition-Metal-Free Amidation of Esters via Tetrahedral Intermediates3.3 Reductive Amidation of Esters4 Transamidations of Amides by Other Mechanisms5 Conclusions and Outlook


2019 ◽  
Vol 17 (41) ◽  
pp. 9232-9242 ◽  
Author(s):  
Ben Hu ◽  
Yuan-Ye Jiang ◽  
Peng Liu ◽  
Rui-Xue Zhang ◽  
Qi Zhang ◽  
...  

The detailed reaction mechanism and structure–activity relationship of substrates in silane reagent-mediated amide bond formation reactions are clarified.


2019 ◽  
Vol 17 (23) ◽  
pp. 5771-5778 ◽  
Author(s):  
Yuan-Ye Jiang ◽  
Ling Zhu ◽  
Xia Fan ◽  
Qi Zhang ◽  
Ya-Jie Fu ◽  
...  

A computational study clarified the detailed mechanisms of H2S release and amide bond formation from thionoesters and cysteine.


1986 ◽  
Vol 51 (17) ◽  
pp. 3320-3324 ◽  
Author(s):  
D. S. Kemp ◽  
Nicholas G. Galakatos ◽  
Stanley Dranginis ◽  
Christopher Ashton ◽  
Nader Fotouhi ◽  
...  

2018 ◽  
Vol 16 (1) ◽  
pp. 30-33
Author(s):  
Ashish Kumar ◽  
Yahya E. Jad ◽  
Ayman El-Faham ◽  
Beatriz G. de la Torre ◽  
Fernando Albericio

A new phosphonium based coupling reagent DEPO-B has been synthesized from 5- (hydroxyimino)-1,3-dimethylpyrimidine-2,4,6 (1H,3H,5H)-trione (Oxyma B) and diethyl chlorophosphate in presence of base. It is a solid material and the hydrolytic stability and solubility was evaluated for confirming its capability for usage in automated peptide synthesizer.


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