scholarly journals Effective Leveraging of Targeted Search Spaces for Improving Peptide Identification in Tandem Mass Spectrometry Based Proteomics

2015 ◽  
Vol 14 (12) ◽  
pp. 5169-5178 ◽  
Author(s):  
Avinash K. Shanmugam ◽  
Alexey I. Nesvizhskii
Keyword(s):  
Mass Spectrometry ◽  
Tandem Mass Spectrometry ◽  
Peptide Identification ◽  
Tandem Mass ◽  
Search Spaces

A computational method for assessing peptide- identification reliability in tandem mass spectrometry analysis with SEQUEST

PROTEOMICS ◽  
2004 ◽  
Vol 4 (4) ◽  
pp. 961-969 ◽  
Author(s):  
Jane Razumovskaya ◽  
Victor Olman ◽  
Dong Xu ◽  
Edward C. Uberbacher ◽  
Nathan C. VerBerkmoes ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Tandem Mass Spectrometry ◽  
Peptide Identification ◽  
Computational Method ◽  
Mass Spectrometry Analysis ◽  
Tandem Mass ◽  
Spectrometry Analysis ◽  
Tandem Mass Spectrometry Analysis

scholarly journals Exploiting the kernel trick to correlate fragment ions for peptide identification via tandem mass spectrometry

2004 ◽  
Vol 20 (12) ◽  
pp. 1948-1954 ◽  
Author(s):  
Y. Fu ◽  
Q. Yang ◽  
R. Sun ◽  
D. Li ◽  
R. Zeng ◽  
...  
Keyword(s):  
Mass Spectrometry ◽  
Tandem Mass Spectrometry ◽  
Peptide Identification ◽  
Tandem Mass ◽  
Kernel Trick ◽  
Fragment Ions
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