A computational method for assessing peptide- identification reliability in tandem mass spectrometry analysis with SEQUEST

Peptide Identification ◽

Computational Method ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Computational Systems Bioinformatics. CSB2003. Proceedings of the 2003 IEEE Bioinformatics Conference. CSB2003 ◽

A computational method for assessing peptide-identification reliability in tandem mass spectrometry analysis with SEQUEST

10.1109/csb.2003.1227353 ◽

2004 ◽

Author(s):

J. Razumovskaya ◽

V. Olman ◽

Don Xu ◽

E. Uberbacher ◽

N. Verbermoes ◽

...

Keyword(s):

Mass Spectrometry ◽

Peptide Identification ◽

Computational Method ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Oscore: a combined score to reduce false negative rates for peptide identification in tandem mass spectrometry analysis

Journal of Mass Spectrometry ◽

10.1002/jms.1466 ◽

2009 ◽

Vol 44 (1) ◽

pp. 25-31 ◽

Cited By ~ 7

Author(s):

Chen Shao ◽

Wei Sun ◽

Fuxin Li ◽

Ruifeng Yang ◽

Ling Zhang ◽

...

Keyword(s):

Mass Spectrometry ◽

False Negative ◽

Peptide Identification ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Potential intake of vitamins “A” and “D” through branded intravenous lipid emulsions: Liquid Chromatography-Tandem Mass Spectrometry Analysis

Clinical Nutrition ◽

10.1016/j.clnu.2016.01.016 ◽

2017 ◽

Vol 36 (2) ◽

pp. 530-536 ◽

Cited By ~ 1

Author(s):

Maria Luisa Forchielli ◽

Matteo Conti ◽

Daniela Patrono ◽

Rita Mancini ◽

Andrea Pession ◽

...

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Tandem Mass ◽

Lipid Emulsions ◽

Spectrometry Analysis ◽

Chromatography Tandem Mass Spectrometry ◽

Liquid Chromatography Tandem Mass

Liquid Chromatography-Nanoelectrospray Ionization-High-Resolution Tandem Mass Spectrometry Analysis of Apurinic/Apyrimidinic Sites in Oral Cell DNA of Cigarette Smokers, e-Cigarette Users, and Nonsmokers

Chemical Research in Toxicology ◽

10.1021/acs.chemrestox.1c00308 ◽

2021 ◽

Author(s):

Jiehong Guo ◽

Joshua Ikuemonisan ◽

Dorothy K. Hatsukami ◽

Stephen S. Hecht

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

High Resolution ◽

Tandem Mass ◽

Cigarette Smokers ◽

Spectrometry Analysis ◽

Nanoelectrospray Ionization

A case study of acute human chlorpyrifos poisoning: Novel aspects on metabolism and toxicokinetics derived from liquid chromatography–tandem mass spectrometry analysis of urine samples

Toxicology Letters ◽

10.1016/j.toxlet.2005.05.013 ◽

2005 ◽

Vol 159 (3) ◽

pp. 235-251 ◽

Cited By ~ 44

Author(s):

Wolfgang Bicker ◽

Michael Lämmerhofer ◽

Dieter Genser ◽

Heinrich Kiss ◽

Wolfgang Lindner

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Chromatography Tandem Mass Spectrometry ◽

Liquid Chromatography Tandem Mass

Metabolic profile of Yi-Xin-Shu capsule in rat by ultra-performance liquid chromatography coupled with quadrupole time-of-flight tandem mass spectrometry analysis

RSC Advances ◽

10.1039/c5ra14260a ◽

2015 ◽

Vol 5 (98) ◽

pp. 80583-80590 ◽

Cited By ~ 6

Author(s):

Hongping Wang ◽

Chang Chen ◽

Yan Liu ◽

Xiaowei Yang ◽

Hongbin Xiao

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Metabolic Profile ◽

Ultra Performance Liquid Chromatography ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Metabolite Profiles

In this study, the metabolite profiles of YXS in different biofluids of rats were investigated.

Tandem Mass Spectrometry Analysis of Polymer Structures and Architectures

Mass Spectrometry in Polymer Chemistry ◽

10.1002/9783527641826.ch3 ◽

2012 ◽

pp. 57-84 ◽

Cited By ~ 9

Author(s):

Vincenzo Scionti ◽

Chrys Wesdemiotis

Keyword(s):

Mass Spectrometry ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Comparative Analysis of the Performаnce of Mascot and IdentiPy Algorithms on a Benchmark Dataset Obtained by Tandem Mass Spectrometry Analysis of Testicular Biopsies

Molecular Biology ◽

10.1134/s0026893319010096 ◽

2019 ◽

Vol 53 (1) ◽

pp. 147-155

Author(s):

A. V. Lisitsa ◽

N. A. Petushkova ◽

L. I. Levitsky ◽

V. G. Zgoda ◽

O. V. Larina ◽

...

Keyword(s):

Mass Spectrometry ◽

Comparative Analysis ◽

Benchmark Dataset ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Nontargeted Tandem Mass Spectrometry Analysis Reveals Diversity and Variability in Aerosol Functional Groups across Multiple Sites, Seasons, and Times of Day

Environmental Science & Technology Letters ◽

10.1021/acs.estlett.9b00702 ◽

2020 ◽

Vol 7 (2) ◽

pp. 60-69 ◽

Cited By ~ 4

Author(s):

Jenna C. Ditto ◽

Taekyu Joo ◽

Jonathan H. Slade ◽

Paul B. Shepson ◽

Nga L. Ng ◽

...

Keyword(s):

Mass Spectrometry ◽

Functional Groups ◽

Tandem Mass ◽

Spectrometry Analysis ◽

Methods in Molecular Biology - Clinical and Preclinical Models for Maximizing Healthspan ◽

Liquid Chromatography Tandem Mass Spectrometry Analysis of Proteins Associated with Age-Related Disorders in Human Pituitary Tissue

10.1007/978-1-0716-0471-7_18 ◽

2020 ◽

pp. 263-276

Author(s):

Paul C. Guest ◽

Daniel Martins-de-Souza

Keyword(s):

Mass Spectrometry ◽

Liquid Chromatography ◽

Tandem Mass ◽

Human Pituitary ◽

Spectrometry Analysis ◽

Age Related ◽

Liquid Chromatography Tandem Mass