Protein Backbone Dynamics Simulations Using Coarse-Grained Bonded Potentials and Simplified Hydrogen Bonds

2010 ◽  
Vol 6 (3) ◽  
pp. 761-773 ◽  
Author(s):  
Tap Ha-Duong
Keyword(s):  
Hydrogen Bonds ◽  
Backbone Dynamics ◽  
Coarse Grained ◽  
Protein Backbone ◽  
Protein Backbone Dynamics ◽  
Dynamics Simulations

scholarly journals A Coarse-Grained Model for Protein Backbone Dynamics

2012 ◽  
Vol 102 (3) ◽  
pp. 474a
Author(s):  
Andreas Wagenmann ◽  
Tihamer Geyer
Keyword(s):  
Backbone Dynamics ◽  
Coarse Grained ◽  
Protein Backbone ◽  
Coarse Grained Model ◽  
Protein Backbone Dynamics

scholarly journals Protein Backbone Dynamics through13C‘−13CαCross-Relaxation in NMR Spectroscopy

2006 ◽  
Vol 128 (34) ◽  
pp. 11072-11078 ◽  
Author(s):  
Fabien Ferrage ◽  
Philippe Pelupessy ◽  
David Cowburn ◽  
Geoffrey Bodenhausen
Keyword(s):  
Nmr Spectroscopy ◽  
Backbone Dynamics ◽  
Protein Backbone ◽  
Protein Backbone Dynamics

scholarly journals Mapping Membrane Protein Backbone Dynamics: A Comparison of Site-Directed Spin Labeling with NMR 15N-Relaxation Measurements

2014 ◽  
Vol 107 (7) ◽  
pp. 1697-1702 ◽  
Author(s):  
Ryan H. Lo ◽  
Brett M. Kroncke ◽  
Tsega L. Solomon ◽  
Linda Columbus
Keyword(s):  
Membrane Protein ◽  
Spin Labeling ◽  
Backbone Dynamics ◽  
15N Relaxation ◽  
Protein Backbone ◽  
Protein Backbone Dynamics ◽  
Relaxation Measurements ◽  
Site Directed Spin Labeling

Protein Backbone Dynamics Revealed by Quasi Spectral Density Function Analysis of Amide N-15 Nuclei

Biochemistry ◽  
1995 ◽  
Vol 34 (10) ◽  
pp. 3162-3171 ◽  
Author(s):  
Riecko Ishima ◽  
Kuniaki Nagayama
Keyword(s):  
Spectral Density ◽  
Density Function ◽  
Function Analysis ◽  
Spectral Density Function ◽  
Backbone Dynamics ◽  
Protein Backbone ◽  
Protein Backbone Dynamics

Protein backbone dynamics by solid-state and solution 15N NMR spectroscopy

1987 ◽  
Vol 72 (1) ◽  
pp. 186-190 ◽  
Author(s):  
M.J Bogusky ◽  
R.A Schiksnis ◽  
G.C Leo ◽  
S.J Opella
Keyword(s):  
Solid State ◽  
Nmr Spectroscopy ◽  
Backbone Dynamics ◽  
15N Nmr ◽  
Protein Backbone ◽  
Protein Backbone Dynamics ◽  
15N Nmr Spectroscopy

scholarly journals Unraveling the complexity of protein backbone dynamics with combined 13C and 15N solid-state NMR relaxation measurements

2015 ◽  
Vol 17 (34) ◽  
pp. 21997-22008 ◽  
Author(s):  
Jonathan M. Lamley ◽  
Matthew J. Lougher ◽  
Hans Juergen Sass ◽  
Marco Rogowski ◽  
Stephan Grzesiek ◽  
...  
Keyword(s):  
Solid State ◽  
Magnetic Fields ◽  
Solid State Nmr ◽  
Nmr Relaxation ◽  
Backbone Dynamics ◽  
Relaxation Rates ◽  
Protein Backbone ◽  
Combined Analysis ◽  
Protein Backbone Dynamics ◽  
Relaxation Measurements

Combined analysis of 13C′ and 15N R1 and R1ρ relaxation rates measured at two magnetic fields leads to improved modeling of backbone dynamics in crystalline protein and provides unique insights into how the same motions contribute differently to relaxation rates in solution and solid state.

scholarly journals Cross-Correlated Relaxation of Dipolar Coupling and Chemical-Shift Anisotropy in Magic-Angle Spinning R1ρ NMR Measurements: Application to Protein Backbone Dynamics Measurements

2016 ◽  
Vol 120 (34) ◽  
pp. 8905-8913 ◽  
Author(s):  
Vilius Kurauskas ◽  
Emmanuelle Weber ◽  
Audrey Hessel ◽  
Isabel Ayala ◽  
Dominique Marion ◽  
...  
Keyword(s):  
Chemical Shift ◽  
Dipolar Coupling ◽  
Chemical Shift Anisotropy ◽  
Magic Angle Spinning ◽  
Backbone Dynamics ◽  
Magic Angle ◽  
Protein Backbone ◽  
Protein Backbone Dynamics ◽  
Angle Spinning
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