scholarly journals Cell-free protein expression systems in microdroplets: Stabilization of interdroplet bilayers

2013 ◽  
Vol 7 (1) ◽  
pp. 014108 ◽  
Author(s):  
Mark S. Friddin ◽  
Hywel Morgan ◽  
Maurits R. R. de Planque
RNA Biology ◽  
2021 ◽  
pp. 1-12
Author(s):  
Yaroslav Chushak ◽  
Svetlana Harbaugh ◽  
Kathryn Zimlich ◽  
Bryan Alfred ◽  
Jorge Chávez ◽  
...  

Biomolecules ◽  
2021 ◽  
Vol 11 (10) ◽  
pp. 1448
Author(s):  
Emiko Kinoshita-Kikuta ◽  
Eiji Kinoshita ◽  
Misaki Suga ◽  
Mana Higashida ◽  
Yuka Yamane ◽  
...  

The production of heterologous proteins is an important procedure for biologists in basic and applied sciences. A variety of cell-based and cell-free protein expression systems are available to achieve this. The expression system must be selected carefully, especially for target proteins that require post-translational modifications. In this study, human Src family kinases were prepared using six different protein expression systems: 293 human embryonic kidney cells, Escherichia coli, and cell-free expression systems derived from rabbit reticulocytes, wheat germ, insect cells, or Escherichia coli. The phosphorylation status of each kinase was analyzed by Phos-tag SDS-PAGE. The kinase activities were also investigated. In the eukaryotic systems, multiple phosphorylated forms of the expressed kinases were observed. In the rabbit reticulocyte lysate system and 293 cells, differences in phosphorylation status between the wild-type and kinase-dead mutants were observed. Whether the expressed kinase was active depended on the properties of both the kinase and each expression system. In the prokaryotic systems, Src and Hck were expressed in autophosphorylated active forms. Clear differences in post-translational phosphorylation among the protein expression systems were revealed. These results provide useful information for preparing functional proteins regulated by phosphorylation.


2015 ◽  
Vol 113 (2) ◽  
pp. 292-300 ◽  
Author(s):  
Dejan Gagoski ◽  
Mark E. Polinkovsky ◽  
Sergey Mureev ◽  
Anne Kunert ◽  
Wayne Johnston ◽  
...  

Lab on a Chip ◽  
2017 ◽  
Vol 17 (18) ◽  
pp. 3037-3042 ◽  
Author(s):  
Yutaka Hori ◽  
Chaitanya Kantak ◽  
Richard M. Murray ◽  
Adam R. Abate

We combine cell-free protein expression systems with droplet microfluidics to enable ultrahigh-throughput parameter space exploration of synthetic biocircuits.


Bioengineered ◽  
2016 ◽  
Vol 8 (4) ◽  
pp. 325-330 ◽  
Author(s):  
J. Porter Hunt ◽  
Seung Ook Yang ◽  
Kristen M. Wilding ◽  
Bradley C. Bundy

2018 ◽  
Vol 115 (8) ◽  
pp. 1904-1914 ◽  
Author(s):  
Dominic J.B. Hunter ◽  
Akshay Bhumkar ◽  
Nichole Giles ◽  
Emma Sierecki ◽  
Yann Gambin

2021 ◽  
Author(s):  
Anibal Arce ◽  
Fernando Guzman ◽  
Chiara Gandini ◽  
Juan Puig ◽  
Tamara Matute ◽  
...  

Cell-free gene expression systems have emerged as a promising platform for field-deployed biosensing and diagnostics. When combined with programmable toehold switch-based RNA sensors, these systems can be used to detect arbitrary RNAs and freeze-dried for room temperature transport to the point-of-need. These sensors, however, have been implemented using reconstituted PURE cell-free protein expression systems that are difficult to source in the Global South due to their high commercial cost and cold-chain shipping requirements. Here, we describe the implementation of RNA toehold switch-based sensors using E. coli cell lysate-based cell-free protein expression systems, which can be produced locally and reduce the cost of sensors by two orders of magnitude. We then demonstrate that these in-house cell lysates provide sensor performance comparable to commercial PURE cell-free systems. We further optimize use of these lysates with a CRISPRi strategy to enhance the stability of linear DNAs, enabling the direct use of PCR products for fast screening of new designs. As a proof-of-concept, we develop novel toeholds sensors for the plant pathogen Potato Virus Y (PVY), which dramatically reduces the yield of this important staple crop. The local implementation of low-cost cell-free toehold sensors could enable biosensing capacity at the regional level and lead to more decentralized models for global surveillance of infectious disease.


Author(s):  
Naser Farrokhi ◽  
Maria Hrmova ◽  
Rachel A. Burton ◽  
Geoffrey B. Fincher

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