scholarly journals Genetic sequence analysis of Arthrobotrys thaumasia DS01 (Monacrosporium thaumasium): A new report from North Sumatra, Indonesia

2021 ◽  
Vol 912 (1) ◽  
pp. 012104
Author(s):  
L D S Hastuti ◽  
K Berliani ◽  
M B Mulya ◽  
A Hartanto ◽  
S Pahlevi
Keyword(s):  
Sequence Analysis ◽  
Urban Area ◽  
Species Identification ◽  
Biocontrol Agent ◽  
Morphological Characteristics ◽  
Soil Samples ◽  
Genetic Sequence ◽  
Molecular Sequencing ◽  
North Sumatra ◽  
Genetic Sequence Analysis

Abstract Exploration of nematode-trapping fungi (NTF) has been conducted previously in urban area, the Medan city, North Sumatra, Indonesia. The survey reported a number of NTF species inhabiting soil samples of organic wastes and decaying litter. Upon finding a suitable NTF isolate as nematode biocontrol agent, species identification is currently carried out based on molecular evidences. One morphotype named isolate DS01 is suspected as member of Arthrobotrys based on morphological characteristics. Molecular sequencing on rDNA or ITS-DNA region has successfully been performed. The genetic sequence was analyzed with database retrieved in NCBI, revealing the identity of A. thaumasia/M. thamasium. Based on recent findings, this is the first report on indigenous strain of A. thaumasia from Indonesia.

An error-correcting code framework for genetic sequence analysis

2004 ◽  
Vol 341 (1-2) ◽  
pp. 89-109 ◽  
Author(s):  
Elebeoba E. May ◽  
Mladen A. Vouk ◽  
Donald L. Bitzer ◽  
David I. Rosnick
Keyword(s):  
Sequence Analysis ◽  
Error Correcting Code ◽  
Genetic Sequence ◽  
Genetic Sequence Analysis

Compression and genetic sequence analysis

Biochimie ◽  
1996 ◽  
Vol 78 (5) ◽  
pp. 315-322 ◽  
Author(s):  
É. Rivals ◽  
M. Dauchet ◽  
J.P. Delahaye ◽  
O. Delgrange
Keyword(s):  
Sequence Analysis ◽  
Genetic Sequence ◽  
Genetic Sequence Analysis

scholarly journals Genetic sequence analysis and characterization of bioactive compounds in mushroom-forming fungi

2021 ◽  
Vol 85 (1) ◽  
pp. 8-12
Author(s):  
Tomohiro Suzuki
Keyword(s):  
Next Generation Sequencing ◽  
Sequence Analysis ◽  
Genetic Analysis ◽  
Bioactive Compounds ◽  
Biosynthetic Pathways ◽  
Genetic Sequence ◽  
Potential Applications ◽  
Genetic Sequence Analysis ◽  
Generation Sequencing

Abstract Mushroom-forming fungi produce unique bioactive compounds that have potential applications as medicines, supplements, and agrochemicals. Thus, it is necessary to clarify the biosynthetic pathways of these compounds using genome and transcriptome analyses. This review introduces some of our research on bioactive compounds isolated from mushrooms, as well as genetic analysis with next-generation sequencing.

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