Human Papillomavirus DNA in Anal CarcinomasComparison of In Situ and Dot Blot Hybridization

1991 ◽  
Vol 96 (3) ◽  
pp. 318-325 ◽  
Author(s):  
MÁire A. Duggan ◽  
Valerie F. Boras ◽  
Masafumi Inoue ◽  
S. Elizabeth McGregor
1989 ◽  
Vol 29 (1) ◽  
pp. 33-37 ◽  
Author(s):  
R. M. Knobler ◽  
S. Schneider ◽  
R. A. Neumann ◽  
W. Bodemer ◽  
B. Radlwimmer ◽  
...  

Genome ◽  
1991 ◽  
Vol 34 (6) ◽  
pp. 998-1006 ◽  
Author(s):  
A. Kumar ◽  
K. S. Rai

The structure and genomic organization of a cloned 5.2-kb repetitive DNA fragment, H-85, isolated from the Aedes albopictus genome have been examined. In situ hybridization of the 3H-labeled H-85 DNA to the meiotic and mitotic chromosome preparations of Ae. albopictus shows that the sequences homologous to H-85 DNA are dispersed throughout the length of all three pairs of chromosomes. A similar pattern of in situ hybridization appears in Aedes seatoi, Aedes flavopictus, and Aedes aegypti. The study shows that the arrangement of sequences in the cloned 5.2-kb fragment is rare in the Ae. albopictus genome. Dot-blot hybridization reveals that the sequences homologous to H-85 DNA are present in 12 species of mosquitoes examined, belonging to six genera in subfamilies Culicinae ad Anophelinae. The H-85 sequences are also present in the genome of Mochlonyx velutinus of the nematocerous family Chaoboridae, earlier proposed as the ancestor of the mosquito family Culicidae. Although the sequences homologous to H-85 DNA are present in different species of mosquitoes, they have diverged in their structure and organization. The cloned 5.2-kb fragment is composed of elements of different and independently evolving repetitive DNA families.Key words: repetitive DNA, organization, mosquitoes.


1991 ◽  
Vol 30 (1) ◽  
pp. 28-34
Author(s):  
Hiroshi TANAKA ◽  
Tamikazu TAZAKI ◽  
Kuniko TAKAMURA ◽  
Yasuyuki HASUO ◽  
Keizou FUJIYOSHI ◽  
...  

1992 ◽  
Vol 17 (6) ◽  
pp. 392-396 ◽  
Author(s):  
R.M. KNOBLER ◽  
S. SCHNEIDER ◽  
B. RADLWIMMER ◽  
W. BODEMER ◽  
W. GEBHART ◽  
...  

2009 ◽  
Vol 24 (4) ◽  
pp. 215-222 ◽  
Author(s):  
Apostolos Zaravinos ◽  
Ioannis N. Mammas ◽  
George Sourvinos ◽  
Demetrios A. Spandidos

Human papillomavirus (HPV) testing can identify women at risk of cervical cancer. Currently, molecular detection methods are the gold standard for identification of HPV. The three categories of molecular assays that are available are based on the detection of HPV DNA and include (1) non-amplified hybridization assays, such as Southern transfer hybridization (STH), dot blot hybridization (DB) and in situ hybridization (ISH); (2) signal amplified hybridization assays, such as hybrid capture assays (HC2); (3) target amplification assays, such as polymerase chain reaction (PCR) and in situ PCR. STH requires large amounts of DNA, is laborious and not reproducible, while ISH has only moderate sensitivity for HPV. The sensitivity of the HC2 assay is similar to that of PCR-based assays, with high sensitivity being achieved by signal rather than target amplification. PCR-based detection is both highly sensitive and specific. Since PCR can be performed on very small amounts of DNA, it is ideal for use on specimens with low DNA content. In the future, with the advance of technology, viral DNA extraction and amplification systems will become more rapid, more sensitive, and more automated.


1993 ◽  
Vol 24 (2) ◽  
pp. 121-125 ◽  
Author(s):  
Máire A. Duggan ◽  
Janine L. Benoit ◽  
S.Elizabeth McGregor ◽  
Jill G. Nation ◽  
Masafumi Inoue ◽  
...  

Parasitology ◽  
1988 ◽  
Vol 97 (1) ◽  
pp. 63-73 ◽  
Author(s):  
W. C. Gibson ◽  
P. Dukes ◽  
J. K. Gashumba

SUMMARYWe have obtained 5 specific DNA probes for African trypanosomes of the subgenera Trypanozoon and Nannomonas. Each probe consists of one repeat unit of the major repetitive DNA (satellite DNA) of each species or intra-specific group. One probe hybridized with all members of subgenus Trypanozoon (except T. equiperdum which was not tested). In subgenus Nannomonas, one probe recognized T. simiae, but 3 probes were needed to identify all stocks of T. congolense available. Each of the 3 latter probes recognized trypanosomes from one of the 3 major groups of T. congolense previously defined by isoenzyme characterization, i.e. savannah, forest and Kenya coast types. As few as 100 trypanosomes could be unequivocally identified by dot blot hybridization and individual trypanosomes could be identified by in situ hybridization. We show how this simple methodology can be used in the field for the identification of immature and mature trypanosome infections in tsetse.


1989 ◽  
Vol 53 (3) ◽  
pp. 201-206
Author(s):  
A. Di Leonardo ◽  
C. Agnese ◽  
P. Cavolina ◽  
A. Maddalena ◽  
G. Sciandrello ◽  
...  

SummarySome HGPRT spontaneous revertants were isolated from a mutant line (E2) of V79 Chinese hamster cells and phenotypically characterized. Dot–Blot hybridization with a 32P-Iabelled HGPRT probe revealed an increase in the number of HGPRT sequences in some of these revertants, suggesting the occurrence of gene amplification. Cytogenetic analysis performed in three of these revertants showed a characteristic abnormally banding region (ABR) on the elongated p arm of the X chromosome. In Situ hybridization in one revertant (RHE2) showed that the amplified sequences reside on the p+ arm of the X chromsome in two different localizations. Because of the very probable clonal origin of the revertant, these features indicate that the amplified sequences might rearrange after their integration into the chromosome.


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