KDM5D-mediated H3K4 demethylation is required for sexually dimorphic gene expression in mouse embryonic fibroblasts

2018 ◽  
Vol 165 (4) ◽  
pp. 335-342 ◽  
Author(s):  
Hayase Mizukami ◽  
Jun-Dal Kim ◽  
Saori Tabara ◽  
Weizhe Lu ◽  
Chulwon Kwon ◽  
...  
PLoS ONE ◽  
2013 ◽  
Vol 8 (12) ◽  
pp. e84062 ◽  
Author(s):  
Yu-Cheng Tu ◽  
Duen-Yi Huang ◽  
Shine-Gwo Shiah ◽  
Jang-Shiun Wang ◽  
Wan-Wan Lin

2019 ◽  
Vol 32 (3) ◽  
pp. 194-204 ◽  
Author(s):  
Ana Pinharanda ◽  
Marjolaine Rousselle ◽  
Simon H. Martin ◽  
Joe J. Hanly ◽  
John W. Davey ◽  
...  

2019 ◽  
Vol 71 (3) ◽  
pp. 455-462
Author(s):  
Anja Tolic ◽  
Jovana Rajic ◽  
Marija Djordjevic ◽  
Milos Djordjevic ◽  
Svetlana Dinic ◽  
...  

Previously, we described the link between C-X-C motif chemokine 12 (Cxcl12) gene induction and DNA hypomethylation in the absence of poly(ADP-ribose) polymerase 1 (PARP-1). We have now firmly established that demethylation is the primary cause of gene induction on the basis of Cxcl12 gene upregulation upon treatment with the demethylating agent 5-azacytidine (5-aza). Since the demethylation state of Cxcl12 is favored by PARP-1 absence, we investigated the presence of ten-eleven translocation (TET) proteins on the Cxcl12 promoter in order to corroborate the relationship between the demethylation process and increased gene expression that occurs in the absence of PARP-1. Analysis was performed on the promoter region within CpG islands of Cxcl12 from control mouse embryonic fibroblasts (NIH3T3) and PARP-1 knock-out mouse embryonic fibroblasts (PARP1-/-). The lack of PARP-1 increased the abundance of TET2 on the Cxcl12 promoter, suggesting that TET-mediated demethylation provoked by the absence of PARP-1 could account for the observed increased expression of this chemokine. Deciphering the regulation of DNA (de)methylation factors that control Cxcl12 expression may provide an additional therapeutic approach in pharmacological interventions where gene switching on or off based on targeted stimulation or inhibition is necessary. [Project of the Serbian Ministry of Education, Science and Technological Development, Grant no. 173020]


2009 ◽  
Vol 88 (5) ◽  
pp. 1003-1015 ◽  
Author(s):  
S.I. Lee ◽  
W.K. Lee ◽  
J.H. Shin ◽  
B.K. Han ◽  
S. Moon ◽  
...  

BMC Genomics ◽  
2007 ◽  
Vol 8 (1) ◽  
pp. 454 ◽  
Author(s):  
Dean A Baker ◽  
Lisa A Meadows ◽  
Jing Wang ◽  
Julian AT Dow ◽  
Steven Russell

1999 ◽  
Vol 65 (4) ◽  
pp. 959-965 ◽  
Author(s):  
Helen W. Davey ◽  
Richard J. Wilkins ◽  
David J. Waxman

2017 ◽  
Vol 9 (3) ◽  
pp. 677-699 ◽  
Author(s):  
Elina Immonen ◽  
Ahmed Sayadi ◽  
Helen Bayram ◽  
Göran Arnqvist

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