scholarly journals DA+data acquisition and analysis software at the Swiss Light Source macromolecular crystallography beamlines

2018 ◽  
Vol 25 (1) ◽  
pp. 293-303 ◽  
Author(s):  
Justyna Aleksandra Wojdyla ◽  
Jakub W. Kaminski ◽  
Ezequiel Panepucci ◽  
Simon Ebner ◽  
Xiaoqiang Wang ◽  
...  

Data acquisition software is an essential component of modern macromolecular crystallography (MX) beamlines, enabling efficient use of beam time at synchrotron facilities. Developed at the Paul Scherrer Institute, theDA+data acquisition software is implemented at all three Swiss Light Source (SLS) MX beamlines.DA+consists of distributed services and components written in Python and Java, which communicateviamessaging and streaming technologies. The major components ofDA+are the user interface, acquisition engine, online processing and database. Immediate data quality feedback is achieved with distributed automatic data analysis routines. The software architecture enables exploration of the full potential of the latest instrumentation at the SLS MX beamlines, such as the SmarGon goniometer and the EIGER X 16M detector, and development of new data collection methods.

2016 ◽  
Vol 72 (a1) ◽  
pp. s192-s192
Author(s):  
Justyna A. Wojdyla ◽  
Ezequiel Panepucci ◽  
Jakub Kaminski ◽  
Simon Ebner ◽  
Xiaoqiang Wang ◽  
...  

2020 ◽  
Vol 27 (3) ◽  
pp. 860-863 ◽  
Author(s):  
Isabelle Martiel ◽  
Dominik Buntschu ◽  
Nathalie Meier ◽  
Alexandre Gobbo ◽  
Ezequiel Panepucci ◽  
...  

In this paper, the design and functionalities of the high-throughput TELL sample exchange system for macromolecular crystallography is presented. TELL was developed at the Paul Scherrer Institute with a focus on speed, storage capacity and reliability to serve the three macromolecular crystallography beamlines of the Swiss Light Source, as well as the SwissMX instrument at SwissFEL.


2008 ◽  
Vol 119 (2) ◽  
pp. 022008 ◽  
Author(s):  
R Bainbridge ◽  
G Baulieu ◽  
S Bel ◽  
J Cole ◽  
N Cripps ◽  
...  

2008 ◽  
Vol 83 (2-3) ◽  
pp. 346-349 ◽  
Author(s):  
A. Neto ◽  
J. Sousa ◽  
B. Carvalho ◽  
H. Fernandes ◽  
R.C. Pereira ◽  
...  

2009 ◽  
Vol 16 (2) ◽  
pp. 143-151 ◽  
Author(s):  
Robin L. Owen ◽  
James M. Holton ◽  
Clemens Schulze-Briese ◽  
Elspeth F. Garman

Accurate measurement of photon flux from an X-ray source, a parameter required to calculate the dose absorbed by the sample, is not yet routinely available at macromolecular crystallography beamlines. The development of a model for determining the photon flux incident on pin diodes is described here, and has been tested on the macromolecular crystallography beamlines at both the Swiss Light Source, Villigen, Switzerland, and the Advanced Light Source, Berkeley, USA, at energies between 4 and 18 keV. These experiments have shown that a simple model based on energy deposition in silicon is sufficient for determining the flux incident on high-quality silicon pin diodes. The derivation and validation of this model is presented, and a web-based tool for the use of the macromolecular crystallography and wider synchrotron community is introduced.


2019 ◽  
Vol 148 (3) ◽  
pp. 205-211
Author(s):  
Manuel Eleazar Martínez-Gutiérrez ◽  
José Rafael Rojano-Cáceres ◽  
Edgard Benítez-Guerrero ◽  
Héctor Eduardo Sánchez-Barrera

2019 ◽  
Vol 14 (10) ◽  
pp. P10033-P10033 ◽  
Author(s):  
Y. Liu ◽  
M.S. Amjad ◽  
P. Baesso ◽  
D. Cussans ◽  
J. Dreyling-Eschweiler ◽  
...  

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